Search results for the GEO ID: GSE29061  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM720205 | GPL570 |
|
CON1
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Huh7 cells transduced with Ad-GFP
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cell line: Huh7 hepatoma cell line
transduction: control
|
CON1
Biological replicate 1
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720205
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720205/suppl/GSM720205.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720205/suppl/GSM720205.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
| | |
|
GSM720206 | GPL570 |
|
CON2
|
Huh7 cells transduced with Ad-GFP
|
cell line: Huh7 hepatoma cell line
transduction: control
|
CON2
Biological replicate 2
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720206
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720206/suppl/GSM720206.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720206/suppl/GSM720206.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
| | |
|
GSM720207 | GPL570 |
|
CON4
|
Huh7 cells transduced with Ad-GFP
|
cell line: Huh7 hepatoma cell line
transduction: control
|
CON4
Biological replicate 3
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720207
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720207/suppl/GSM720207.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720207/suppl/GSM720207.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
| | |
|
GSM720208 | GPL570 |
|
ORF2-(F1)
|
Huh7 cells transduced with Ad-HEV ORF2
|
cell line: Huh7 hepatoma cell line
transduction: Ad-HEV ORF2
|
ORF2-(F1)
Biological replicate 1
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720208
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720208/suppl/GSM720208.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720208/suppl/GSM720208.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
| | |
|
GSM720209 | GPL570 |
|
ORF2-(F4)
|
Huh7 cells transduced with Ad-HEV ORF2
|
cell line: Huh7 hepatoma cell line
transduction: Ad-HEV ORF2
|
ORF2-(F4)
Biological replicate 2
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720209
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720209/suppl/GSM720209.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720209/suppl/GSM720209.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
| | |
|
GSM720210 | GPL570 |
|
ORF2-(F5)
|
Huh7 cells transduced with Ad-HEV ORF2
|
cell line: Huh7 hepatoma cell line
transduction: Ad-HEV ORF2
|
ORF2-(F5)
Biological replicate 3
Gene expression data from the expression of hepatitis E virus ORF2 protein in Huh7 cell lines
|
| Sample_geo_accession | GSM720210
| | Sample_status | Public on Dec 01 2012
| | Sample_submission_date | May 04 2011
| | Sample_last_update_date | Dec 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Huh7 cell lines were transduce with adenovirus expressing green fluorecent protein or adenovirus expressing the HEV ORF2 protein
| | Sample_growth_protocol_ch1 | Huh7 cell lines wer grown in DMEM medium with high glucose and non essential aminoacids at 37 degree celsius
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizon mehtod according to the manufactures instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotnylated cRNA were prepared accroding to the standard affymetrix protocol from 6ug RNA (Expression Analysis technical manual)
| | Sample_hyb_protocol | Following fragmentation, 10ug of Crna were hybridized for 16 hour at 45 degree celsius on HGU133 PLUS 2 ARRAY.Genechip were washed and stained in the Affymetrix Fluidics station 400
| | Sample_scan_protocol | Gene chips were scanned using the affymetrix scanner
| | Sample_data_processing | The data were analyzed with the Microarray suite version 5.0(MAS 5.0) using Affymetrix default analysis settings as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | lijo,,john
| | Sample_contact_email | lijo.john@uni-rostock.de
| | Sample_contact_phone | 00493814945069
| | Sample_contact_laboratory | Vektorologie und Experimentelle Gentherapie
| | Sample_contact_department | Biomedizinisches Forschungszentrum (BMFZ)
| | Sample_contact_institute | Universitätsklinikum Rostock
| | Sample_contact_address | Schillingallee 69
| | Sample_contact_city | Rostock
| | Sample_contact_state | Mecklenberg Vorpomen
| | Sample_contact_zip/postal_code | D-18057
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.gentherapie.med.uni-rostock.de/
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720210/suppl/GSM720210.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM720nnn/GSM720210/suppl/GSM720210.CHP.gz
| | Sample_series_id | GSE29061
| | Sample_data_row_count | 54675
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