Home
Search
Browse
Statistics
User guide
FAQs
Post question
Download
Process data
Search results for the GEO ID: GSE29077
(Click on the check boxes provided under "Select for analysis", to initiate grouping)
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group.
Scroll down
)
GSM ID
GPL ID
Select for analysis
Title
Source name
Description
Characteristics
GSM720475
GPL571
A549 vehicle control (3206)
A549 cells
cell line: A549 agent: DMSO dose: control
DMSO treated 3206_A549_VEH_1.CHP A549 VEH 3206_A549_VEH_1.CEL
GSM720476
GPL571
A549 vehicle control (3207)
A549 cells
cell line: A549 agent: DMSO dose: control
DMSO treated 3207_A549_VEH_2.CHP A549 VEH 3207_A549_VEH_2.CEL
GSM720477
GPL571
A549 AZA 0.3uM (3210)
A549 cells
cell line: A549 agent: azacitidine dose: 0.3uM
azacitidine treated 48h 3210_A549_0.3 uM_Aza_1.CHP A549 0.3A 3210_A549_0.3 uM_Aza_1.CEL
GSM720478
GPL571
A549 AZA 0.3uM (3211)
A549 cells
cell line: A549 agent: azacitidine dose: 0.3uM
azacitidine treated 48h 3211_A549_0.3uM_Aza_2.CHP A549 0.3A 3211_A549_0.3uM_Aza_2.CEL
GSM720479
GPL571
A549 AZA 1 uM (3212)
A549 cells
cell line: A549 agent: azacitidine dose: 1 uM
azacitidine treated 48h 3212_A549_1uM_Aza_1.CHP A549 1A 3212_A549_1uM_Aza_1.CEL
GSM720480
GPL571
A549 AZA 1 uM (3213)
A549 cells
cell line: A549 agent: azacitidine dose: 1 uM
azacitidine treated 48h 3213_A549_1uM_Aza_2.CHP A549 1A 3213_A549_1uM_Aza_2.CEL
GSM720481
GPL571
A549 AZA 3 uM (3214)
A549 cells
cell line: A549 agent: azacitidine dose: 3 uM
azacitidine treated 48h 3214_A549_3uM_Aza_1.CHP A549 3A 3214_A549_3uM_Aza_1.CEL
GSM720482
GPL571
A549 AZA 3 uM (3215)
A549 cells
cell line: A549 agent: azacitidine dose: 3 uM
azacitidine treated 48h 3215_A549_3uM_Aza_2.CHP A549 3A 3215_A549_3uM_Aza_2.CEL
GSM720483
GPL571
A549 DAC 0.3 uM (3218)
A549 cells
cell line: A549 agent: decitabine dose: 0.3 uM
decitabine treated 48h 3218_A549_0.3uM-Dac_1.CHP A549 0.3D 3218_A549_0.3uM-Dac_1.CEL
GSM720484
GPL571
A549 DAC 0.3 uM (3219)
A549 cells
cell line: A549 agent: decitabine dose: 0.3 uM
decitabine treated 48h 3219_A549_0.3uM-Dac_2.CHP A549 0.3D 3219_A549_0.3uM-Dac_2.CEL
GSM720485
GPL571
A549 DAC 1 uM (3220)
A549 cells
cell line: A549 agent: decitabine dose: 1 uM
decitabine treated 48h 3220_A549_1uM-Dac_1.CHP A549 1D 3220_A549_1uM-Dac_1.CEL
GSM720486
GPL571
A549 DAC 1 uM (3221)
A549 cells
cell line: A549 agent: decitabine dose: 1 uM
decitabine treated 48h 3221_A549_1uM-Dac_2.CHP A549 1D 3221_A549_1uM-Dac_2.CEL
GSM720487
GPL571
A549 DAC 3 uM (3222)
A549 cells
cell line: A549 agent: decitabine dose: 3 uM
decitabine treated 48h 3222_A549_3 uM Dac_1_REPEAT.CHP A549 3D 3222_A549_3 uM Dac_1_REPEAT.CEL
GSM720488
GPL571
A549 DAC 3 uM (3223)
A549 cells
cell line: A549 agent: decitabine dose: 3 uM
decitabine treated 48h 3223_A549_3uM-Dac_2.CHP A549 3D 3223_A549_3uM-Dac_2.CEL
GSM720489
GPL571
H1299 vehicle control (3224)
H1299 cells
cell line: H1299 agent: DMSO dose: control
DMSO treated 3224_H1299_VEH_1.CHP H1299 VEH 3224_H1299_VEH_1.CEL
GSM720490
GPL571
H1299 vehicle control (3225)
H1299 cells
cell line: H1299 agent: DMSO dose: control
DMSO treated 3225_H1299_VEH_2.CHP H1299 VEH 3225_H1299_VEH_2.CEL
GSM720491
GPL571
H1299 AZA 0.3 uM (3228)
H1299 cells
cell line: H1299 agent: azacitidine dose: 0.3 uM
azacitidine treated 48h 3228_H1299_0.3uM-Aza_1.CHP H1299 0.3A 3228_H1299_0.3uM-Aza_1.CEL
GSM720492
GPL571
H1299 AZA 0.3 uM (3229)
H1299 cells
cell line: H1299 agent: azacitidine dose: 0.3 uM
azacitidine treated 48h 3229_H1299_0.3uM-Aza_2.CHP H1299 0.3A 3229_H1299_0.3uM-Aza_2.CEL
GSM720493
GPL571
H1299 AZA 1 uM (3230)
H1299 cells
cell line: H1299 agent: azacitidine dose: 1 uM
azacitidine treated 48h 3230_H1299_1uM-Aza_1.CHP H1299 1A 3230_H1299_1uM-Aza_1.CEL
GSM720494
GPL571
H1299 AZA 1 uM (3231)
H1299 cells
cell line: H1299 agent: azacitidine dose: 1 uM
azacitidine treated 48h 3231_H1299_1uM-Aza_2.CHP H1299 1A 3231_H1299_1uM-Aza_2.CEL
GSM720495
GPL571
H1299 AZA 3 uM (3232)
H1299 cells
cell line: H1299 agent: azacitidine dose: 3 uM
azacitidine treated 48h 3232_H1299_3uM-Aza_1.CHP H1299 3A 3232_H1299_3uM-Aza_1.CEL
GSM720496
GPL571
H1299 AZA 3 uM (3233)
H1299 cells
cell line: H1299 agent: azacitidine dose: 3 uM
azacitidine treated 48h 3233_H1299_3uM-Aza_2.CHP H1299 3A 3233_H1299_3uM-Aza_2.CEL
GSM720497
GPL571
H1299 DAC 0.3 uM (3236)
H1299 cells
cell line: H1299 agent: decitabine dose: 0.3 uM
decitabine treated 48h 3236_H1299_0.3uM-Dac_1.CHP H1299 0.3D 3236_H1299_0.3uM-Dac_1.CEL
GSM720498
GPL571
H1299 DAC 0.3 uM (3237)
H1299 cells
cell line: H1299 agent: decitabine dose: 0.3 uM
decitabine treated 48h 3237_H1299_0.3uM-Dac_2.CHP H1299 0.3D 3237_H1299_0.3uM-Dac_2.CEL
GSM720499
GPL571
H1299 DAC 1 uM (3238)
H1299 cells
cell line: H1299 agent: decitabine dose: 1 uM
decitabine treated 48h 3238_H1299_1uM-Dac_1.CHP H1299 1D 3238_H1299_1uM-Dac_1.CEL
GSM720500
GPL571
H1299 DAC 1 uM (3239)
H1299 cells
cell line: H1299 agent: decitabine dose: 1 uM
decitabine treated 48h 3239_H1299_1uM-Dac_2.CHP H1299 1D 3239_H1299_1uM-Dac_2.CEL
GSM720501
GPL571
H1299 DAC 3 uM (3240)
H1299 cells
cell line: H1299 agent: decitabine dose: 3 uM
decitabine treated 48h 3240_H1299_3uM-Dac_1.CHP H1299 3D 3240_H1299_3uM-Dac_1.CEL
GSM720502
GPL571
H1299 DAC 3 uM (3241)
H1299 cells
cell line: H1299 agent: decitabine dose: 3 uM
decitabine treated 48h 3241_H1299_3uM-Dac_2.CHP H1299 3D 3241_H1299_3uM-Dac_2.CEL
Make groups for comparisons
(2 groups will be compared at a time)
Select GSMs and click on "Add groups"
Enter the group name here:
Select expression type
Transcripts profile based on;
A. Differential status (Up/Down regulation)
Regulation type
Up
Down
Up/Down
Fold change
2
4
6
8
10
p-value
0.05
0.01
0.001
0.0001
0.00001
B. Absolute calls (Transcribed/Not-detected)
Derive calls within/across groups
Within groups
Detection status
Transcribed
Not-detected
Both
Percentage detection
10
20
30
40
50
60
70
80
90
100
Across groups
Detection status
First group:
Transcribed
Not-detected
-
Second group:
Transcribed
Not-detected
Percentage detection
First group:
10
20
30
40
50
60
70
80
90
100
-
Second group:
10
20
30
40
50
60
70
80
90
100
Filter results by number of probes
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100