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Process data
Search results for the GEO ID: GSE29175
(Click on the check boxes provided under "Select for analysis", to initiate grouping)
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group.
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GSM ID
GPL ID
Select for analysis
Title
Source name
Description
Characteristics
GSM722058
GPL571
CAOV3
ovarian cancer cells
cell line: CAOV3 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13740_CAOV3_HG-U133A+2.CEL
GSM722059
GPL571
HEY
ovarian cancer cells
cell line: HEY cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13741_HEY_HG-U133A+2.CEL
GSM722060
GPL571
JHOS-2
ovarian cancer cells
cell line: JHOS-2 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13742_JHOS-2_HG-U133A+2.CEL
GSM722061
GPL571
JHOS-3
ovarian cancer cells
cell line: JHOS-3 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13743_JHOS-3_HG-U133A+2.CEL
GSM722062
GPL571
JHOS-4
ovarian cancer cells
cell line: JHOS-4 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13744_JHOS-4_HG-U133A+2.CEL
GSM722063
GPL571
OV90
ovarian cancer cells
cell line: OV90 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13745_OV90_HG-U133A+2.CEL
GSM722064
GPL571
OVARY1847
ovarian cancer cells
cell line: OVARY1847 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13746_OVARY1847_HG-U133A+2.CEL
GSM722065
GPL571
OVCA420
ovarian cancer cells
cell line: OVCA420 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13747_OVCA420_HG-U133A+2.CEL
GSM722066
GPL571
OVCA429
ovarian cancer cells
cell line: OVCA429 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13748_OVCA429_HG-U133A+2.CEL
GSM722067
GPL571
OVCA432
ovarian cancer cells
cell line: OVCA432 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13749_OVCA432_HG-U133A+2.CEL
GSM722068
GPL571
OVCA433
ovarian cancer cells
cell line: OVCA433 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13750_OVCA433_HG-U133A+2.CEL
GSM722069
GPL571
OVCAR3
ovarian cancer cells
cell line: OVCAR3 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13751_OVCAR3_HG-U133A+2.CEL
GSM722070
GPL571
SKOV3
ovarian cancer cells
cell line: SKOV3 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13752_SKOV3_HG-U133A+2.CEL
GSM722071
GPL571
JHOC-5
ovarian cancer cells
cell line: JHOC-5 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13753_JHOC-5_HG-U133A+2.CEL
GSM722072
GPL571
JHOC-7
ovarian cancer cells
cell line: JHOC-7 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13754_JHOC-7_HG-U133A+2.CEL
GSM722073
GPL571
JHOC-8
ovarian cancer cells
cell line: JHOC-8 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13755_JHOC-8_HG-U133A+2.CEL
GSM722074
GPL571
JHOC-9
ovarian cancer cells
cell line: JHOC-9 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13756_JHOC-9_HG-U133A+2.CEL
GSM722075
GPL571
KOC-5C
ovarian cancer cells
cell line: KOC-5C cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13757_KOC-5C_HG-U133A+2.CEL
GSM722076
GPL571
KOC-7C
ovarian cancer cells
cell line: KOC-7C cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13758_KOC-7C_HG-U133A+2.CEL
GSM722077
GPL571
OVISE
ovarian cancer cells
cell line: OVISE cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13759_OVISE_HG-U133A+2.CEL
GSM722078
GPL571
OVTOKO
ovarian cancer cells
cell line: OVTOKO cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13760_OVTOKO_HG-U133A+2.CEL
GSM722079
GPL571
RMG-1
ovarian cancer cells
cell line: RMG-1 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13761_RMG-1_HG-U133A+2.CEL
GSM722080
GPL571
RMG-2
ovarian cancer cells
cell line: RMG-2 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13762_RMG-2_HG-U133A+2.CEL
GSM722081
GPL571
RMG-5
ovarian cancer cells
cell line: RMG-5 cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13763_RMG-5_HG-U133A+2.CEL
GSM722082
GPL571
TAYA
ovarian cancer cells
cell line: TAYA cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13764_TAYA_HG-U133A+2.CEL
GSM722083
GPL571
TOV-21G
ovarian cancer cells
cell line: TOV-21G cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13765_TOV-21G_HG-U133A+2.CEL
GSM722084
GPL571
IGROV1
ovarian cancer cells
cell line: IGROV1 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13767_IGROV1_HG-U133A+2.CEL
GSM722085
GPL571
OVK-18
ovarian cancer cells
cell line: OVK-18 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13768_OVK-18_HG-U133A+2.CEL
GSM722086
GPL571
TOV-112D
ovarian cancer cells
cell line: TOV-112D cell type: ovarian cancer cells gender: female treatment: none histology: OCCC
1317_2745_13769_TOV-112D_HG-U133A+2.CEL
GSM722087
GPL571
JHOM-1
ovarian cancer cells
cell line: JHOM-1 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13770_JHOM-1_HG-U133A+2.CEL
GSM722088
GPL571
JHOM-2B
ovarian cancer cells
cell line: JHOM-2B cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13771_JHOM-2B_HG-U133A+2.CEL
GSM722089
GPL571
MCAS
ovarian cancer cells
cell line: MCAS cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13772_MCAS_HG-U133A+2.CEL
GSM722090
GPL571
OMC-3
ovarian cancer cells
cell line: OMC-3 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13773_OMC-3_HG-U133A+2.CEL
GSM722091
GPL571
A2780
ovarian cancer cells
cell line: A2780 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13774_A2780_HG-U133A+2.CEL
GSM722092
GPL571
BG1
ovarian cancer cells
cell line: BG1 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13775_BG1_HG-U133A+2.CEL
GSM722093
GPL571
OVCAR8
ovarian cancer cells
cell line: OVCAR8 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13776_OVCAR8_HG-U133A+2.CEL
GSM722094
GPL571
PEO1
ovarian cancer cells
cell line: PEO1 cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13777_PEO1_HG-U133A+2.CEL
GSM722095
GPL571
TYK-nu
ovarian cancer cells
cell line: TYK-nu cell type: ovarian cancer cells gender: female treatment: none histology: non-OCCC
1317_2745_13778_TYK-nu_HG-U133A+2.CEL
Make groups for comparisons
(2 groups will be compared at a time)
Select GSMs and click on "Add groups"
Enter the group name here:
Select expression type
Transcripts profile based on;
A. Differential status (Up/Down regulation)
Regulation type
Up
Down
Up/Down
Fold change
2
4
6
8
10
p-value
0.05
0.01
0.001
0.0001
0.00001
B. Absolute calls (Transcribed/Not-detected)
Derive calls within/across groups
Within groups
Detection status
Transcribed
Not-detected
Both
Percentage detection
10
20
30
40
50
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80
90
100
Across groups
Detection status
First group:
Transcribed
Not-detected
-
Second group:
Transcribed
Not-detected
Percentage detection
First group:
10
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100
-
Second group:
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Filter results by number of probes
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