Search results for the GEO ID: GSE29327  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM724630 | GPL570 |
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MCF10A_miR_221_222_mimic_1
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MCF10A_miR_221_222_mimic
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cell line: MCF10A
treatment: miR-221/222
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| Sample_geo_accession | GSM724630
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724630/suppl/GSM724630.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
| | |
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GSM724631 | GPL570 |
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MCF10A_miR_221_222_mimic_2
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MCF10A_miR_221_222_mimic
|
cell line: MCF10A
treatment: miR-221/222
|
|
| Sample_geo_accession | GSM724631
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724631/suppl/GSM724631.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
| | |
|
GSM724632 | GPL570 |
|
MCF10A_miR_221_222_mimic_3
|
MCF10A_miR_221_222_mimic
|
cell line: MCF10A
treatment: miR-221/222
|
|
| Sample_geo_accession | GSM724632
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724632/suppl/GSM724632.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
| | |
|
GSM724633 | GPL570 |
|
MCF10A_miR_control_1
|
MCF10A_miR_control
|
cell line: MCF10A
treatment: miR-control
|
|
| Sample_geo_accession | GSM724633
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724633/suppl/GSM724633.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
| | |
|
GSM724634 | GPL570 |
|
MCF10A_miR_control_2
|
MCF10A_miR_control
|
cell line: MCF10A
treatment: miR-control
|
|
| Sample_geo_accession | GSM724634
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724634/suppl/GSM724634.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
| | |
|
GSM724635 | GPL570 |
|
MCF10A_miR_control_3
|
MCF10A_miR_control
|
cell line: MCF10A
treatment: miR-control
|
|
| Sample_geo_accession | GSM724635
| | Sample_status | Public on Jun 14 2011
| | Sample_submission_date | May 16 2011
| | Sample_last_update_date | Jun 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the manufacturer’s instruction
| | Sample_hyb_protocol | According to the manufacturer’s instruction
| | Sample_scan_protocol | According to the manufacturer’s instruction
| | Sample_data_processing | Expression was normalized and estimated using RMA (bioconductor package)
| | Sample_platform_id | GPL570
| | Sample_contact_name | Peng,,Yue
| | Sample_contact_email | pengy@gene.com
| | Sample_contact_phone | 650-467-3587
| | Sample_contact_institute | Genentech Inc
| | Sample_contact_address | 1 DNA Way
| | Sample_contact_city | South San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94080
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM724nnn/GSM724635/suppl/GSM724635.CEL.gz
| | Sample_series_id | GSE29327
| | Sample_data_row_count | 54675
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