Search results for the GEO ID: GSE29883  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM740080 | GPL570 |
|
inv(16) [CBF#4]
|
mononuclear cells from peripheral blood
|
age (years): 57
gender: f
flt3-itd: WT
flt3-tkd: WT
|
CBF#4
UB_SL_01072010_09PB7178.CEL
|
| Sample_geo_accession | GSM740080
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740080/suppl/GSM740080.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740081 | GPL570 |
|
inv(16) [CBF#6]
|
mononuclear cells from bone marrow
|
age (years): 47
gender: f
flt3-itd: WT
flt3-tkd: WT
kit: WT
|
CBF#6
UB_SL_01072010_10KM2260.CEL
|
| Sample_geo_accession | GSM740081
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740081/suppl/GSM740081.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740082 | GPL570 |
|
inv(16) [CBF#10]
|
mononuclear cells from peripheral blood
|
age (years): 36
gender: f
flt3-itd: WT
flt3-tkd: MUT
nras: WT
kit: WT
|
CBF#10
UB_270706_05PB2554.CEL
|
| Sample_geo_accession | GSM740082
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740082/suppl/GSM740082.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740083 | GPL570 |
|
t(8;21) [CBF#11]
|
mononuclear cells from bone marrow
|
age (years): 37
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: WT
kit: MUT
|
CBF#11
UB_110806_05KM4148.CEL
|
| Sample_geo_accession | GSM740083
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740083/suppl/GSM740083.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740084 | GPL570 |
|
inv(16) [CBF#12]
|
mononuclear cells from bone marrow
|
age (years): 48
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: MUT
kit: WT
|
CBF#12
UB_210806_05KM4251.CEL
|
| Sample_geo_accession | GSM740084
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740084/suppl/GSM740084.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740085 | GPL570 |
|
inv(16) [CBF#13]
|
mononuclear cells from bone marrow
|
age (years): 56
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: MUT
kit: WT
|
CBF#13
UB_110806_05KM4272.CEL
|
| Sample_geo_accession | GSM740085
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740085/suppl/GSM740085.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740086 | GPL570 |
|
inv(16) [CBF#14]
|
mononuclear cells from bone marrow
|
age (years): 60
gender: f
flt3-itd: WT
flt3-tkd: WT
nras: MUT
kit: WT
|
CBF#14
UB_06KM4240_10062008.CEL
|
| Sample_geo_accession | GSM740086
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740086/suppl/GSM740086.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740087 | GPL570 |
|
t(8;21) [CBF#15]
|
mononuclear cells from bone marrow
|
age (years): 36
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: WT
kit: MUT
|
CBF#15
SH_02102008_06KM7146.CEL
|
| Sample_geo_accession | GSM740087
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740087/suppl/GSM740087.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740088 | GPL570 |
|
t(8;21) [CBF#16]
|
mononuclear cells from bone marrow
|
age (years): 35
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: MUT
kit: WT
|
CBF#16
SH_02102008_06KM7333.CEL
|
| Sample_geo_accession | GSM740088
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740088/suppl/GSM740088.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740089 | GPL570 |
|
inv(16) [CBF#17]
|
mononuclear cells from bone marrow
|
age (years): 31
gender: f
flt3-itd: WT
flt3-tkd: MUT
nras: MUT
kit: WT
|
CBF#17
SH_02102008_07KM2609.CEL
|
| Sample_geo_accession | GSM740089
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740089/suppl/GSM740089.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
| | |
|
GSM740090 | GPL570 |
|
inv(16) [CBF#18]
|
mononuclear cells from bone marrow
|
age (years): 50
gender: m
flt3-itd: WT
flt3-tkd: WT
nras: WT
kit: MUT
|
CBF#18
UB_14082008_07KM3381.CEL
|
| Sample_geo_accession | GSM740090
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740090/suppl/GSM740090.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
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GSM740091 | GPL570 |
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inv(16) [CBF#19]
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mononuclear cells from bone marrow
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age (years): 54
gender: f
flt3-itd: WT
flt3-tkd: WT
nras: WT
kit: MUT
|
CBF#19
UB_13012009_08KM3870.CEL
|
| Sample_geo_accession | GSM740091
| | Sample_status | Public on Jun 11 2011
| | Sample_submission_date | Jun 10 2011
| | Sample_last_update_date | Jun 11 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Samples are from untreated patients (de novo AML)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA was purified with a TRIzol-based protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | For each sample preparation, total RNA was converted into double-stranded cDNA by reverse transcription using the 3' IVT Express Kit from Affymetrix according to the manufacturer's recommendations.
| | Sample_hyb_protocol | Hybridization, washing, and staining protocols, respectively, were performed on Affymetrix GeneChip instruments (Hybridization Oven 640, Fluidics Station FS450) as recommended by the manufacturer.
| | Sample_scan_protocol | Scanning was performed on Affymetrix GeneChip Scanner GCS3000 instruments as recommended by the manufacturer using default settings. The software used was GCOS 1.2 or higher.
| | Sample_data_processing | The data were analyzed with BRB ArrayTools using RMA. Intensity values were log2 transformed
| | Sample_platform_id | GPL570
| | Sample_contact_name | Lars,,Bullinger
| | Sample_contact_email | lars.bullinger@uniklinik-ulm.de
| | Sample_contact_phone | +49-731-500-45501
| | Sample_contact_fax | +49-731-500-45505
| | Sample_contact_department | Internal Medicine III
| | Sample_contact_institute | University of Ulm
| | Sample_contact_address | Albert-Einstein-Allee 23
| | Sample_contact_city | Ulm
| | Sample_contact_zip/postal_code | 89081
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM740nnn/GSM740091/suppl/GSM740091.CEL.gz
| | Sample_series_id | GSE29883
| | Sample_data_row_count | 54675
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