Search results for the GEO ID: GSE30498  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM756498 | GPL1261 |
|
2D SCG cells, biological rep1
|
SCG cells cultured on 2D substrate (polystyrene Petri dish)
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 2D cultured SCG cells
|
| Sample_geo_accession | GSM756498
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756498/suppl/GSM756498_SCG_2D_1.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756499 | GPL1261 |
|
2D SCG cells, biological rep2
|
SCG cells cultured on 2D substrate (polystyrene Petri dish)
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 2D cultured SCG cells
|
| Sample_geo_accession | GSM756499
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756499/suppl/GSM756499_SCG_2D_2.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756500 | GPL1261 |
|
2D SCG cells, biological rep3
|
SCG cells cultured on 2D substrate (polystyrene Petri dish)
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 2D cultured SCG cells
|
| Sample_geo_accession | GSM756500
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756500/suppl/GSM756500_SCG_2D_3.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756501 | GPL1261 |
|
2D SCG cells, biological rep4
|
SCG cells cultured on 2D substrate (polystyrene Petri dish)
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 2D cultured SCG cells
|
| Sample_geo_accession | GSM756501
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756501/suppl/GSM756501_SCG_2D_4.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756502 | GPL1261 |
|
3D SCG cells, biological rep1
|
SCG cells cultured in 3D polystyrene scaffolds
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 3D cultured SCG cells
|
| Sample_geo_accession | GSM756502
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756502/suppl/GSM756502_SCG_3D_1.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756503 | GPL1261 |
|
3D SCG cells, biological rep2
|
SCG cells cultured in 3D polystyrene scaffolds
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 3D cultured SCG cells
|
| Sample_geo_accession | GSM756503
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756503/suppl/GSM756503_SCG_3D_2.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756504 | GPL1261 |
|
3D SCG cells, biological rep3
|
SCG cells cultured in 3D polystyrene scaffolds
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 3D cultured SCG cells
|
| Sample_geo_accession | GSM756504
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756504/suppl/GSM756504_SCG_3D_3.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756505 | GPL1261 |
|
3D SCG cells, biological rep4
|
SCG cells cultured in 3D polystyrene scaffolds
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from 3D cultured SCG cells
|
| Sample_geo_accession | GSM756505
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756505/suppl/GSM756505_SCG_3D_4.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756506 | GPL1261 |
|
SCG tissue, biological rep1
|
SCG cells from freshly dissected tissue
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from SCG tissue
|
| Sample_geo_accession | GSM756506
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756506/suppl/GSM756506_SCG_tissue_1.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756507 | GPL1261 |
|
SCG tissue, biological rep2
|
SCG cells from freshly dissected tissue
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from SCG tissue
|
| Sample_geo_accession | GSM756507
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756507/suppl/GSM756507_SCG_tissue_2.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756508 | GPL1261 |
|
SCG tissue, biological rep3
|
SCG cells from freshly dissected tissue
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from SCG tissue
|
| Sample_geo_accession | GSM756508
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756508/suppl/GSM756508_SCG_tissue_3.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
| | |
|
GSM756509 | GPL1261 |
|
SCG tissue, biological rep4
|
SCG cells from freshly dissected tissue
|
strain: CD1
age: 21 days
tissue: superior cervical ganglion
|
Gene expression data from SCG tissue
|
| Sample_geo_accession | GSM756509
| | Sample_status | Public on Jul 07 2012
| | Sample_submission_date | Jul 07 2011
| | Sample_last_update_date | Jul 07 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from all samples using Qiagen RNeasy Kits (Qiagen,Valencia, CA) according to the manufacturer’s standard protocol.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labelled 2 ug Total RNA according to Eberwine protocol using Target Amp kit, Epicentre(Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Scanned on Affymetrix scanner 3000 with 7G upgrade
| | Sample_data_processing | The data were analyzed with Affymetrix expression console using Robust Multichip Average (RMA) method with Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | William,,Kisaalita
| | Sample_contact_email | williamk@engr.uga.edu
| | Sample_contact_phone | 7065420835
| | Sample_contact_institute | University of Georgia
| | Sample_contact_address | Dritmier Engineering Center
| | Sample_contact_city | Athens
| | Sample_contact_state | GA
| | Sample_contact_zip/postal_code | 30605
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM756nnn/GSM756509/suppl/GSM756509_SCG_tissue_4.CEL.gz
| | Sample_series_id | GSE30498
| | Sample_data_row_count | 45101
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