Search results for the GEO ID: GSE3110 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM69268 | GPL1355 |
|
CH2110
|
Supraoptic nucleus_3d dehydrated
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 dehydrated animals (3 Days)
|
Sample_geo_accession | GSM69268
| Sample_status | Public on Dec 15 2005
| Sample_submission_date | Aug 10 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_label_protocol_ch1 |
| Sample_label_protocol_ch1 | 500ng total RNA was used initially
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69268/suppl/GSM69268_CH2110_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69457 | GPL1355 |
|
CH2111
|
Supraoptic nucleus_3d dehydrated
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 dehydrated animals (3 Days)
|
Sample_geo_accession | GSM69457
| Sample_status | Public on Dec 15 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_label_protocol_ch1 |
| Sample_label_protocol_ch1 | 500ng total RNA was used initially
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69457/suppl/GSM69457_CH2111_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69458 | GPL1355 |
|
CH2112
|
Supraoptic nucleus_3d dehydrated
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 dehydrated animals (3 Days)
|
Sample_geo_accession | GSM69458
| Sample_status | Public on Dec 15 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_label_protocol_ch1 | 500ng total RNA was used initially
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69458/suppl/GSM69458_CH2112_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69459 | GPL1355 |
|
CH2113
|
Supraoptic nucleus_3d dehydrated
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 dehydrated animals (3 Days)
|
Sample_geo_accession | GSM69459
| Sample_status | Public on Dec 15 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69459/suppl/GSM69459_CH2113_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69460 | GPL1355 |
|
CH2114
|
Supraoptic nucleus_3d dehydrated
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 dehydrated animals (3 Days)
|
Sample_geo_accession | GSM69460
| Sample_status | Public on Dec 15 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69460/suppl/GSM69460_CH2114_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69461 | GPL1355 |
|
CH2120
|
Supraoptic nucleus_control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 control animals
|
Sample_geo_accession | GSM69461
| Sample_status | Public on Dec 01 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69461/suppl/GSM69461_CH2120_rat230plus2_080605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE8491
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69462 | GPL1355 |
|
CH2121
|
Supraoptic nucleus_control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 control animals
|
Sample_geo_accession | GSM69462
| Sample_status | Public on Dec 01 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69462/suppl/GSM69462_CH2121_rat230plus2_090605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE8491
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69463 | GPL1355 |
|
CH2122
|
Supraoptic nucleus_control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 control animals
|
Sample_geo_accession | GSM69463
| Sample_status | Public on Dec 01 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69463/suppl/GSM69463_CH2122_rat230plus2_090605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE8491
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69464 | GPL1355 |
|
CH2123
|
Supraoptic nucleus_control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 control animals
|
Sample_geo_accession | GSM69464
| Sample_status | Public on Dec 01 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69464/suppl/GSM69464_CH2123_rat230plus2_090605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE8491
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
GSM69465 | GPL1355 |
|
CH2124
|
Supraoptic nucleus_control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Hypothalamic Supraoptic nucleus
|
Sample represents the supraoptic nucleus from 5 control animals
|
Sample_geo_accession | GSM69465
| Sample_status | Public on Dec 01 2005
| Sample_submission_date | Aug 11 2005
| Sample_last_update_date | Dec 29 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG column (Eppendorf). RNA was further purified using RNeasy minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent).
| Sample_label_ch1 | MessageAmpII aRNA Amplification kit (Ambion)
| Sample_label_protocol_ch1 | Protocol available at http://www.AMBION.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM69nnn/GSM69465/suppl/GSM69465_CH2124_rat230plus2_090605.CEL.gz
| Sample_series_id | GSE3110
| Sample_series_id | GSE4130
| Sample_series_id | GSE8491
| Sample_series_id | GSE25574
| Sample_series_id | GSE30733
| Sample_data_row_count | 31099
| |
|
|
|
Make groups for comparisons |
(2 groups will be compared at a time) |
|
Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|