Search results for the GEO ID: GSE31150 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM771022 | GPL1261 |
|
Pancreas from adult Rkip-1 KO mice, biological replicate 1
|
Whole pancreas
|
tissue: Whole pancreas
genotype: Rkip-1 KO
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of Rkip-1 KO mice
|
Sample_geo_accession | GSM771022
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771022/suppl/GSM771022.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
|
GSM771023 | GPL1261 |
|
Pancreas from adult Rkip-1 KO mice, biological replicate 2
|
Whole pancreas
|
tissue: Whole pancreas
genotype: Rkip-1 KO
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of Rkip-1 KO mice
|
Sample_geo_accession | GSM771023
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771023/suppl/GSM771023.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
|
GSM771024 | GPL1261 |
|
Pancreas from adult Rkip-1 KO mice, biological replicate 3
|
Whole pancreas
|
tissue: Whole pancreas
genotype: Rkip-1 KO
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of Rkip-1 KO mice
|
Sample_geo_accession | GSM771024
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771024/suppl/GSM771024.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
|
GSM771025 | GPL1261 |
|
Pancreas from adult WT mice, biological replicate 1
|
Whole pancreas
|
tissue: Whole pancreas
genotype: WT
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of WT mice
|
Sample_geo_accession | GSM771025
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771025/suppl/GSM771025.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
|
GSM771026 | GPL1261 |
|
Pancreas from adult WT mice, biological replicate 2
|
Whole pancreas
|
tissue: Whole pancreas
genotype: WT
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of WT mice
|
Sample_geo_accession | GSM771026
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771026/suppl/GSM771026.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
|
GSM771027 | GPL1261 |
|
Pancreas from adult WT mice, biological replicate 3
|
Whole pancreas
|
tissue: Whole pancreas
genotype: WT
background: C57BL/6
age: 8 weeks
|
Pancreatic gene expression analysis of WT mice
|
Sample_geo_accession | GSM771027
| Sample_status | Public on Nov 19 2012
| Sample_submission_date | Aug 02 2011
| Sample_last_update_date | Nov 19 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Pancreases were rapidly dissected after the sacrifice of the animals.
| Sample_growth_protocol_ch1 | Rkip1 KO and WT mice were derived from the same colony, maintained in a C57BL/6 background.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from whole pancreas using the RNAgents Total RNA Isolation System (Promega, WI, USA)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized, washed and stained according to the standard Affymetrix protocol.
| Sample_scan_protocol | GeneChips were scanned according to the standard Affymetrix protocol (Affymetrix Genechip Command Console program 3.0.0.1214, scanner GCS 3000-7G)
| Sample_data_processing | Raw data was background adjusted, normalized and summarized by Robust Multi-array Analysis (RMA) using the Affy package from Bioconductor on R language.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jordi,,Altirriba
| Sample_contact_email | jorge.altirriba@unige.ch
| Sample_contact_phone | 0041223795420
| Sample_contact_laboratory | Laboratoire du Métabolisme
| Sample_contact_department | Dpts de Médecine Interne et de Physiologie cellulaire et Métabolisme
| Sample_contact_institute | Centre Médical Universitaire de Genève
| Sample_contact_address | Rue Michel-Servet 1
| Sample_contact_city | Genève
| Sample_contact_zip/postal_code | 1211
| Sample_contact_country | Switzerland
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM771nnn/GSM771027/suppl/GSM771027.CEL.gz
| Sample_series_id | GSE31150
| Sample_data_row_count | 45101
| |
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