Search results for the GEO ID: GSE31323  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM776957 | GPL570 |
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stromal
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prostate stromal
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disease state: Benign Prostatic Hyperplasia
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by laser micro-dissection
Raw data file: 110119-11023A_1_(HG-U133_Plus_2).CEL
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| Sample_geo_accession | GSM776957
| | Sample_status | Public on Aug 10 2011
| | Sample_submission_date | Aug 10 2011
| | Sample_last_update_date | Aug 10 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using GCRMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | wujiang,,Liu
| | Sample_contact_email | liuwujiang@bjmu.edu.cn
| | Sample_contact_phone | 86-10-66139902
| | Sample_contact_fax | 86-10-66122487
| | Sample_contact_department | Urology
| | Sample_contact_institute | Peking University
| | Sample_contact_address | 8,xushiku,xicheng
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100034
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM776nnn/GSM776957/suppl/GSM776957.CEL.gz
| | Sample_series_id | GSE31323
| | Sample_data_row_count | 54675
| | |
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GSM776958 | GPL570 |
|
epithelium
|
prostate epithelium
|
disease state: Benign Prostatic Hyperplasia
|
by laser micro-dissection
Raw data file: 110119-11023A_2_(HG-U133_Plus_2).CEL
|
| Sample_geo_accession | GSM776958
| | Sample_status | Public on Aug 10 2011
| | Sample_submission_date | Aug 10 2011
| | Sample_last_update_date | Aug 10 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using GCRMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | wujiang,,Liu
| | Sample_contact_email | liuwujiang@bjmu.edu.cn
| | Sample_contact_phone | 86-10-66139902
| | Sample_contact_fax | 86-10-66122487
| | Sample_contact_department | Urology
| | Sample_contact_institute | Peking University
| | Sample_contact_address | 8,xushiku,xicheng
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100034
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM776nnn/GSM776958/suppl/GSM776958.CEL.gz
| | Sample_series_id | GSE31323
| | Sample_data_row_count | 54675
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