Search results for the GEO ID: GSE31447  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM780823 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 1
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 24hrs
|
|
| Sample_geo_accession | GSM780823
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780823/suppl/GSM780823_AR_1_090910.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780823/suppl/GSM780823_AR_1_090910.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM780861 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 2
|
LCLs
|
cell type: LCL
treatment: TG
time: 24hrs
|
|
| Sample_geo_accession | GSM780861
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780861/suppl/GSM780861_4_AR_2_090910.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780861/suppl/GSM780861_AR_2_090910.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM780863 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 3
|
LCLs
|
cell type: LCL
treatment: SAL
time: 24hrs
|
|
| Sample_geo_accession | GSM780863
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780863/suppl/GSM780863_1_AR_3_090910.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780863/suppl/GSM780863_AR_3_090910.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM780864 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 4
|
LCLs
|
cell type: LCL
treatment: TG+SAL
time: 24hrs
|
|
| Sample_geo_accession | GSM780864
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780864/suppl/GSM780864_1_AR_4_090910.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM780nnn/GSM780864/suppl/GSM780864_AR_4_090910.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781214 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 5
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 24hrs
|
|
| Sample_geo_accession | GSM781214
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781214/suppl/GSM781214_AR_5_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781214/suppl/GSM781214_AR_5_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781215 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 6
|
LCLs
|
cell type: LCL
treatment: TG
time: 24hrs
|
|
| Sample_geo_accession | GSM781215
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781215/suppl/GSM781215_AR_6_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781215/suppl/GSM781215_AR_6_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781216 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 7
|
LCLs
|
cell type: LCL
treatment: SAL
time: 24hrs
|
|
| Sample_geo_accession | GSM781216
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781216/suppl/GSM781216_AR_7_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781216/suppl/GSM781216_AR_7_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781217 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 8
|
LCLs
|
cell type: LCL
treatment: TG+SAL
time: 24hrs
|
|
| Sample_geo_accession | GSM781217
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781217/suppl/GSM781217_AR_8_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781217/suppl/GSM781217_AR_8_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781218 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 9
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 72hrs
|
|
| Sample_geo_accession | GSM781218
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781218/suppl/GSM781218_1_AR_9_091610.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781218/suppl/GSM781218_AR_9_091610.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781265 | GPL570 |
|
Effect of ER stress on gene expression in LCLs 10
|
LCLs
|
cell type: LCL
treatment: TG
time: 72hrs
|
|
| Sample_geo_accession | GSM781265
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781265/suppl/GSM781265_1_AR_10_091610.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781265/suppl/GSM781265_AR_10_091610.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781285 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 11
|
LCLs
|
cell type: LCL
treatment: SAL
time: 72hrs
|
|
| Sample_geo_accession | GSM781285
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781285/suppl/GSM781285_1_AR_11_091610.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781285/suppl/GSM781285_AR_11_091610.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781286 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 12
|
LCLs
|
cell type: LCL
treatment: TG+SAL
time: 72hrs
|
|
| Sample_geo_accession | GSM781286
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781286/suppl/GSM781286_1_AR_12_091610.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781286/suppl/GSM781286_AR_12_091610.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781287 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 13
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 72hrs
|
|
| Sample_geo_accession | GSM781287
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Standard Affymetrix
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781287/suppl/GSM781287_AR_13_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781287/suppl/GSM781287_AR_13_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781686 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 14
|
LCLs
|
cell type: LCL
treatment: TG
time: 72hrs
|
|
| Sample_geo_accession | GSM781686
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781686/suppl/GSM781686_AR_14_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781686/suppl/GSM781686_AR_14_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781687 | GPL570 |
|
Effects of ER stress on gene expression in LCLs, 15
|
LCLs
|
cell type: LCL
treatment: SAL
time: 72hrs
|
|
| Sample_geo_accession | GSM781687
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781687/suppl/GSM781687_AR_15_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781687/suppl/GSM781687_AR_15_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781688 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 16.
|
LCLs
|
cell type: LCL
treatment: TG+SAL
time: 72hrs
|
|
| Sample_geo_accession | GSM781688
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781688/suppl/GSM781688_AR_16_091610.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781688/suppl/GSM781688_AR_16_091610.rma.chp.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM781689 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 1a
|
LCLs
|
cell type: LCL
treatment: TG
time: 3hrs
|
|
| Sample_geo_accession | GSM781689
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 17 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781689/suppl/GSM781689_2_H0045426.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM781nnn/GSM781689/suppl/GSM781689_H0045426.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785126 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 1b
|
LCLs
|
cell type: LCL
treatment: TG
time: 3hrs
|
|
| Sample_geo_accession | GSM785126
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785126/suppl/GSM785126_2_H0045427.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785126/suppl/GSM785126_H0045427.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785127 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 1c
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 3hrs
|
|
| Sample_geo_accession | GSM785127
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785127/suppl/GSM785127_3_H0045428.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785127/suppl/GSM785127_H0045428.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785128 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 1d
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 3hrs
|
|
| Sample_geo_accession | GSM785128
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785128/suppl/GSM785128_2_H0045429.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785128/suppl/GSM785128_H0045429.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785133 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 2a
|
LCLs
|
cell type: LCL
treatment: TG
time: 3hrs
|
|
| Sample_geo_accession | GSM785133
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785133/suppl/GSM785133_2_H0045430.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785133/suppl/GSM785133_H0045430.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785134 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 2b
|
LCLs
|
cell type: LCL
treatment: TG
time: 3hrs
|
|
| Sample_geo_accession | GSM785134
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785134/suppl/GSM785134_3_H0045431.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785134/suppl/GSM785134_H0045431.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785135 | GPL570 |
|
Effects of ER stress on gene expression in LCLs 2c
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 3hrs
|
|
| Sample_geo_accession | GSM785135
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785135/suppl/GSM785135_1_H0045432.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785135/suppl/GSM785135_H0045432.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
GSM785136 | GPL570 |
|
Effects of ER stress ion gene expression in LCLs, 2d
|
LCLs
|
cell type: LCL
treatment: DMSO
time: 3hrs
|
|
| Sample_geo_accession | GSM785136
| | Sample_status | Public on Aug 23 2011
| | Sample_submission_date | Aug 23 2011
| | Sample_last_update_date | Aug 23 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| | Sample_hyb_protocol | Standard Affymetrix Protocol
| | Sample_scan_protocol | Standard Affymetrix Protocol
| | Sample_data_processing | RMA, Expression Console
| | Sample_platform_id | GPL570
| | Sample_contact_name | Adam,,Rosendorff
| | Sample_contact_email | arosendorff@gmail.com
| | Sample_contact_phone | 412-692-9015
| | Sample_contact_laboratory | Rosendorff-Virology
| | Sample_contact_department | Pathology
| | Sample_contact_institute | University of Pittsburgh
| | Sample_contact_address | 530 45th Street, 3rd Fl, Bay 9
| | Sample_contact_city | Pittsburgh
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 15224
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785136/suppl/GSM785136_1_H0045433.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM785nnn/GSM785136/suppl/GSM785136_H0045433.CEL.gz
| | Sample_series_id | GSE31447
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
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