Search results for the GEO ID: GSE31797  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM788602 | GPL1261 |
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Insig1 flox/flox /Insig2 -/- InsigKO_C1
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Insig1 flox/flox /Insig2 -/-
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source tissue: lung
strain: Insig1 flox/flox /Insig2 -/- ( AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
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|
| Sample_geo_accession | GSM788602
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788602/suppl/GSM788602_WJ_C1_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
|
GSM788603 | GPL1261 |
|
Insig1 flox/flox /Insig2 -/- InsigKO_C2
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Insig1 flox/flox /Insig2 -/-
|
source tissue: lung
strain: Insig1 flox/flox /Insig2 -/- ( AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
|
|
| Sample_geo_accession | GSM788603
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788603/suppl/GSM788603_WJ_C2_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
|
GSM788604 | GPL1261 |
|
Insig1 flox/flox /Insig2 -/- InsigKO_C3
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Insig1 flox/flox /Insig2 -/-
|
source tissue: lung
strain: Insig1 flox/flox /Insig2 -/- ( AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
|
|
| Sample_geo_accession | GSM788604
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788604/suppl/GSM788604_WJ_C3_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
|
GSM788631 | GPL1261 |
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Insig1 ∆/∆ /Insig2 -/- InsigKO_E1
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Insig1 ∆/∆ /Insig2 -/-
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source tissue: lung
strain: Insig1 ∆/∆ /Insig2 -/- (AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
|
|
| Sample_geo_accession | GSM788631
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788631/suppl/GSM788631_WJ_E1_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
|
GSM788632 | GPL1261 |
|
Insig1 ∆/∆ /Insig2 -/- InsigKO_E2
|
Insig1 ∆/∆ /Insig2 -/-
|
source tissue: lung
strain: Insig1 ∆/∆ /Insig2 -/- (AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
|
|
| Sample_geo_accession | GSM788632
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788632/suppl/GSM788632_WJ_E2_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
|
GSM788637 | GPL1261 |
|
Insig1 ∆/∆ /Insig2 -/- InsigKO_E3
|
Insig1 ∆/∆ /Insig2 -/-
|
source tissue: lung
strain: Insig1 ∆/∆ /Insig2 -/- (AT2 cells obtained from 2 months old SpC-rTTA / Otet-CRE / Insig1 flox/flox / Insig2-/- mice treated with doxycycline from E6.5 to E12.5. Control animals lacked either SpC-rtTA or Otet-CRE)
cell type: Alveolar Type II
|
|
| Sample_geo_accession | GSM788637
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Aug 31 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tyII cells by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | MAS 5.0
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM788nnn/GSM788637/suppl/GSM788637_WJ_E3_Mouse430_2.CEL.gz
| | Sample_series_id | GSE31797
| | Sample_data_row_count | 45101
| | |
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