Sample_geo_accession | GSM790818
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Sample_status | Public on Jul 03 2013
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Sample_submission_date | Sep 06 2011
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Sample_last_update_date | Jul 03 2013
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Sample_type | RNA
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Sample_channel_count | 1
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Sample_organism_ch1 | Homo sapiens
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Sample_taxid_ch1 | 9606
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Sample_treatment_protocol_ch1 | Cells were treated with 40U/ml of inteferon for 6h.
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Sample_molecule_ch1 | total RNA
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Sample_extract_protocol_ch1 | RNeasy Mini Kit (Qiagen) was used to extract RNA according to the manufacturer's protocol
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Sample_label_ch1 | biotin
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Sample_label_protocol_ch1 | First and second strand cDNA was prepared using Superscirpt Choice System (invitrogen). Biotinylated cRNA were prepared using RNA Transcript Labeling Kit (T7) (Enzo) according to the manufacturer's protocol.
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Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on the GeneChip Human Genome U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
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Sample_scan_protocol | Genechips were scaned on the GeneArray® Scanner or the GeneChip® Scanner 3000
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Sample_data_processing | MAS5.0 (Algorithm: ExpressionStat 5.0)
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Sample_platform_id | GPL570
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Sample_contact_name | Qiuyue,,Chen
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Sample_contact_email | Qiuyue.Chen@UTSouthwestern.edu
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Sample_contact_phone | (214) 648-3078
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Sample_contact_laboratory | Jin Ye
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Sample_contact_department | Molecular Genetics
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Sample_contact_institute | UT Southwestern Medical Center
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Sample_contact_address | 5323 Harry Hines Blvd.
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Sample_contact_city | Dallas
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Sample_contact_state | TX
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Sample_contact_zip/postal_code | 75390
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Sample_contact_country | USA
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM790nnn/GSM790818/suppl/GSM790818.CEL.gz
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM790nnn/GSM790818/suppl/GSM790818.CHP.gz
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Sample_series_id | GSE31903
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Sample_series_id | GSE31962
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Sample_data_row_count | 54675
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