Search results for the GEO ID: GSE31938  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM791395 | GPL1261 |
|
HYP1-CT
|
hypothalamus from wild type mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: wild type
|
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| Sample_geo_accession | GSM791395
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791395/suppl/GSM791395.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791396 | GPL1261 |
|
HYP7-KO
|
hypothalamus from nestin-Pex5 -/- mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: nestin-Pex5 -/-
|
|
| Sample_geo_accession | GSM791396
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791396/suppl/GSM791396.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791397 | GPL1261 |
|
HYP2-CT
|
hypothalamus from wild type mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: wild type
|
|
| Sample_geo_accession | GSM791397
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791397/suppl/GSM791397.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791398 | GPL1261 |
|
HYP8-KO
|
hypothalamus from nestin-Pex5 -/- mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: nestin-Pex5 -/-
|
|
| Sample_geo_accession | GSM791398
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791398/suppl/GSM791398.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791399 | GPL1261 |
|
HYP3-CT
|
hypothalamus from wild type mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: wild type
|
|
| Sample_geo_accession | GSM791399
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791399/suppl/GSM791399.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791401 | GPL1261 |
|
HYP4-CT
|
hypothalamus from wild type mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: wild type
|
|
| Sample_geo_accession | GSM791401
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791401/suppl/GSM791401.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
|
GSM791402 | GPL1261 |
|
HYP10-KO
|
hypothalamus from nestin-Pex5 -/- mouse
|
tissue: hypothalamus
time(weeks): 10 weeks
genotype: nestin-Pex5 -/-
|
|
| Sample_geo_accession | GSM791402
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Mar 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | None
| | Sample_growth_protocol_ch1 | Normal conditions
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of RNA according to manufacturer's specifications
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was converted to double stranded cDNAconcentration and subsequently converted and amplified to antisense cRNA and labeled with biotin. All amplification and labelling steps were performed on a Biomek 3000 ArrayPlex Workstation (Beckman Coulter).
| | Sample_hyb_protocol | A mixture of purified and fragmented biotinylated cRNA and hybridisation controls (Affymetrix) was hybridised on Affymetrix Mouse 430 2.0 arrays followed by staining and washing in GeneChip fuidics station 450 (Affymetrix) according to the manufacturer's procedures
| | Sample_scan_protocol | To assess the raw probe signal intensities, chips were scanned using a GeneChip scanner 3000 (Affymetrix)
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Emiel,,Ver Loren van Themaat
| | Sample_contact_email | themaat@mpiz-koeln.mpg.de
| | Sample_contact_institute | Max Planck Institute
| | Sample_contact_address | Carl von linneweg
| | Sample_contact_city | Cologne
| | Sample_contact_zip/postal_code | 50823
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791402/suppl/GSM791402.CEL.gz
| | Sample_series_id | GSE31938
| | Sample_data_row_count | 45101
| | |
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