Search results for the GEO ID: GSE31942  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM791436 | GPL1261 |
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STAT1-/- tumor, primary, mouse 1
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primary STAT1-/- mammary tumor
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strain: 129 Sv/Ev
cancer type: mammary adenocarcinoma
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Gene expression data from a primary STAT1-/- mammary tumor.
|
| Sample_geo_accession | GSM791436
| | Sample_status | Public on Dec 15 2011
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Dec 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Female STAT1-/- mice were monitored until palpable mammary adenocarcinomas developed. Tumors around 1 cm in diameters were harvested and processed for gene expression analysis.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Genechip 3000.
| | Sample_data_processing | The data was analyzed with dChip using default analysis settings.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Szeman,Ruby,Chan
| | Sample_contact_email | schan@pathology.wustl.edu
| | Sample_contact_phone | 3143628746
| | Sample_contact_department | Pathology and Immunology
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 425 S. Euclid Ave
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791436/suppl/GSM791436.CEL.gz
| | Sample_series_id | GSE31942
| | Sample_data_row_count | 45037
| | |
|
GSM791437 | GPL1261 |
|
STAT1-/- tumor, primary, mouse 2
|
primary STAT1-/- mammary tumor
|
strain: 129 Sv/Ev
cancer type: mammary adenocarcinoma
|
Gene expression data from a primary STAT1-/- mammary tumor.
|
| Sample_geo_accession | GSM791437
| | Sample_status | Public on Dec 15 2011
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Dec 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Female STAT1-/- mice were monitored until palpable mammary adenocarcinomas developed. Tumors around 1 cm in diameters were harvested and processed for gene expression analysis.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Genechip 3000.
| | Sample_data_processing | The data was analyzed with dChip using default analysis settings.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Szeman,Ruby,Chan
| | Sample_contact_email | schan@pathology.wustl.edu
| | Sample_contact_phone | 3143628746
| | Sample_contact_department | Pathology and Immunology
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 425 S. Euclid Ave
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791437/suppl/GSM791437.CEL.gz
| | Sample_series_id | GSE31942
| | Sample_data_row_count | 45037
| | |
|
GSM791438 | GPL1261 |
|
STAT1-/- tumor, primary, mouse 3
|
primary STAT1-/- mammary tumor
|
strain: 129 Sv/Ev
cancer type: mammary adenocarcinoma
|
Gene expression data from a primary STAT1-/- mammary tumor.
|
| Sample_geo_accession | GSM791438
| | Sample_status | Public on Dec 15 2011
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Dec 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Female STAT1-/- mice were monitored until palpable mammary adenocarcinomas developed. Tumors around 1 cm in diameters were harvested and processed for gene expression analysis.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Genechip 3000.
| | Sample_data_processing | The data was analyzed with dChip using default analysis settings.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Szeman,Ruby,Chan
| | Sample_contact_email | schan@pathology.wustl.edu
| | Sample_contact_phone | 3143628746
| | Sample_contact_department | Pathology and Immunology
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 425 S. Euclid Ave
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791438/suppl/GSM791438.CEL.gz
| | Sample_series_id | GSE31942
| | Sample_data_row_count | 45037
| | |
|
GSM791439 | GPL1261 |
|
STAT1-/- tumor, primary, mouse 4
|
primary STAT1-/- mammary tumor
|
strain: 129 Sv/Ev
cancer type: mammary adenocarcinoma
|
Gene expression data from a primary STAT1-/- mammary tumor.
|
| Sample_geo_accession | GSM791439
| | Sample_status | Public on Dec 15 2011
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Dec 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Female STAT1-/- mice were monitored until palpable mammary adenocarcinomas developed. Tumors around 1 cm in diameters were harvested and processed for gene expression analysis.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Genechip 3000.
| | Sample_data_processing | The data was analyzed with dChip using default analysis settings.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Szeman,Ruby,Chan
| | Sample_contact_email | schan@pathology.wustl.edu
| | Sample_contact_phone | 3143628746
| | Sample_contact_department | Pathology and Immunology
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 425 S. Euclid Ave
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791439/suppl/GSM791439.CEL.gz
| | Sample_series_id | GSE31942
| | Sample_data_row_count | 45037
| | |
|
GSM791440 | GPL1261 |
|
STAT1-/- tumor, primary, mouse 6
|
primary STAT1-/- mammary tumor
|
strain: 129 Sv/Ev
cancer type: mammary adenocarcinoma
|
Gene expression data from a primary STAT1-/- mammary tumor.
|
| Sample_geo_accession | GSM791440
| | Sample_status | Public on Dec 15 2011
| | Sample_submission_date | Sep 06 2011
| | Sample_last_update_date | Dec 15 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Female STAT1-/- mice were monitored until palpable mammary adenocarcinomas developed. Tumors around 1 cm in diameters were harvested and processed for gene expression analysis.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Genechip 3000.
| | Sample_data_processing | The data was analyzed with dChip using default analysis settings.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Szeman,Ruby,Chan
| | Sample_contact_email | schan@pathology.wustl.edu
| | Sample_contact_phone | 3143628746
| | Sample_contact_department | Pathology and Immunology
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 425 S. Euclid Ave
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM791nnn/GSM791440/suppl/GSM791440.CEL.gz
| | Sample_series_id | GSE31942
| | Sample_data_row_count | 45037
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