Search results for the GEO ID: GSE32463  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM803268 | GPL339 |
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Tumorspheres Affy#1099A_-TMS
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tumorspheres (passage 3-5)
|
sample type: tumorspheres
|
gene expression data from tumorspheres
|
| Sample_geo_accession | GSM803268
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803268/suppl/GSM803268_Affy_1099A_-TMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803269 | GPL339 |
|
Tumorspheres Affy#1100A_-TMS
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tumorspheres (passage 3-5)
|
sample type: tumorspheres
|
gene expression data from tumorspheres
|
| Sample_geo_accession | GSM803269
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803269/suppl/GSM803269_Affy_1100A_-TMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803270 | GPL339 |
|
Tumorspheres Affy#1101A_-TMS
|
tumorspheres (passage 3-5)
|
sample type: tumorspheres
|
gene expression data from tumorspheres
|
| Sample_geo_accession | GSM803270
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803270/suppl/GSM803270_Affy_1101A_-TMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803271 | GPL339 |
|
Mammospheres Affy#858A-R_UMS
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mammosphere (passage 3-5)
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strain: FVB/N
sample type: mammospheres
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gene expression data from mammospheres
|
| Sample_geo_accession | GSM803271
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803271/suppl/GSM803271_Affy_858A-R_UMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803272 | GPL339 |
|
Mammospheres Affy#859A_--UMS
|
mammosphere (passage 3-5)
|
strain: FVB/N
sample type: mammospheres
|
gene expression data from mammospheres
|
| Sample_geo_accession | GSM803272
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803272/suppl/GSM803272_Affy_859A_--UMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803273 | GPL339 |
|
Mammospheres Affy#860A_--UMS
|
mammosphere (passage 3-5)
|
strain: FVB/N
sample type: mammospheres
|
gene expression data from mammospheres
|
| Sample_geo_accession | GSM803273
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803273/suppl/GSM803273_Affy_860A_--UMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803274 | GPL339 |
|
Mammospheres induced to differentiate in serum Affy#861A_--DMS
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mammospheres induced to differentiate (7 days) in serum
|
strain: FVB/N
sample type: mammospheres induced to differentiate in serum
|
gene expression data from mammospheres induced to differentiate
|
| Sample_geo_accession | GSM803274
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803274/suppl/GSM803274_Affy_861A_--DMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803275 | GPL339 |
|
Mammospheres induced to differentiate in serum Affy#862A_--DMS
|
mammospheres induced to differentiate (7 days) in serum
|
strain: FVB/N
sample type: mammospheres induced to differentiate in serum
|
gene expression data from mammospheres induced to differentiate
|
| Sample_geo_accession | GSM803275
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803275/suppl/GSM803275_Affy_862A_--DMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
| | |
|
GSM803276 | GPL339 |
|
Mammospheres induced to differentiate in serum Affy#863A_--DMS
|
mammospheres induced to differentiate (7 days) in serum
|
strain: FVB/N
sample type: mammospheres induced to differentiate in serum
|
gene expression data from mammospheres induced to differentiate
|
| Sample_geo_accession | GSM803276
| | Sample_status | Public on Jan 30 2012
| | Sample_submission_date | Sep 28 2011
| | Sample_last_update_date | Jan 30 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | tumorspheres and mammospheres were passaged every 7 days in mouse stem cell media and harvested for RNA between passages 3-5. Mammospheres were placed in serum containing media and allowed to differentiate for 7 days.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from tumorspheres, mammospheres or mammospheres induced to differentiate using an RNAeasy mini prep kit (QIAGEN, Hilden, Germany) according to the manufacturer’s protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA from 3 independent tumorsphere, mammosphere, and mammospheres induced to differentiate cell populations was used to prepare cRNA probes for hybridization to MOE430A Gene ChipsTM in accordance with manufacturer’s protocols (Affymetrix, Santa Clara, California)
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | standard Affymetrix protocol
| | Sample_data_processing | The data was analyzed with Genespring
| | Sample_platform_id | GPL339
| | Sample_contact_name | Robin,,Hallett
| | Sample_contact_email | halletrm@mcmaster.ca
| | Sample_contact_laboratory | Hassell
| | Sample_contact_department | Biochemistry and Biomedical Sciences
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main St W
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8S 4L8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM803nnn/GSM803276/suppl/GSM803276_Affy_863A_--DMS.CEL.gz
| | Sample_series_id | GSE32463
| | Sample_data_row_count | 22690
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