Search results for the GEO ID: GSE32887  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM813832 | GPL570 |
|
Skin_sarc_12NL
|
Sarcoidosis Skin NL subj 12
|
subject: 12
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813832
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813832/suppl/GSM813832.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813833 | GPL570 |
|
Skin_sarc_11TL
|
Sarcoidosis Skin TL subj 11
|
subject: 11
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813833
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813833/suppl/GSM813833.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813834 | GPL570 |
|
Skin_sarc_2TL
|
Sarcoidosis Skin TL subj 2
|
subject: 2
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813834
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813834/suppl/GSM813834.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813835 | GPL570 |
|
Skin_sarc_4TL
|
Sarcoidosis Skin TL subj 4
|
subject: 4
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813835
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813835/suppl/GSM813835.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813836 | GPL570 |
|
Skin_sarc_1TL
|
Sarcoidosis Skin TL subj 1
|
subject: 1
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813836
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813836/suppl/GSM813836.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813837 | GPL570 |
|
Skin_sarc_7TL
|
Sarcoidosis Skin TL subj 7
|
subject: 7
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813837
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813837/suppl/GSM813837.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813838 | GPL570 |
|
Skin_sarc_6TL
|
Sarcoidosis Skin TL subj 6
|
subject: 6
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813838
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813838/suppl/GSM813838.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813839 | GPL570 |
|
Skin_sarc_14TL
|
Sarcoidosis Skin TL subj 14
|
subject: 14
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813839
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813839/suppl/GSM813839.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813840 | GPL570 |
|
Skin_sarc_9TL
|
Sarcoidosis Skin TL subj 9
|
subject: 9
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813840
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813840/suppl/GSM813840.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813841 | GPL570 |
|
Skin_sarc_12TL
|
Sarcoidosis Skin TL subj 12
|
subject: 12
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813841
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813841/suppl/GSM813841.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813842 | GPL570 |
|
Skin_norm_18NL
|
normal Skin NL subj 18
|
subject: 18
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813842
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813842/suppl/GSM813842.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813843 | GPL570 |
|
Skin_sarc_7NL
|
Sarcoidosis Skin NL subj 7
|
subject: 7
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813843
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813843/suppl/GSM813843.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813844 | GPL570 |
|
Skin_sarc_9NL
|
Sarcoidosis Skin NL subj 9
|
subject: 9
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813844
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813844/suppl/GSM813844.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813845 | GPL570 |
|
Skin_sarc_10NL
|
Sarcoidosis Skin NL subj 10
|
subject: 10
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813845
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813845/suppl/GSM813845.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813846 | GPL570 |
|
Skin_sarc_15TL
|
Sarcoidosis Skin TL subj 15
|
subject: 15
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813846
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813846/suppl/GSM813846.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813847 | GPL570 |
|
Skin_sarc_8TL
|
Sarcoidosis Skin TL subj 8
|
subject: 8
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813847
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813847/suppl/GSM813847.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813848 | GPL570 |
|
Skin_norm_17NL
|
normal Skin NL subj 17
|
subject: 17
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813848
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813848/suppl/GSM813848.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813849 | GPL570 |
|
Skin_sarc_5TL
|
Sarcoidosis Skin TL subj 5
|
subject: 5
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813849
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813849/suppl/GSM813849.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813850 | GPL570 |
|
Skin_norm_19NL
|
normal Skin NL subj 19
|
subject: 19
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813850
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813850/suppl/GSM813850.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813851 | GPL570 |
|
Skin_sarc_4NL
|
Sarcoidosis Skin NL subj 4
|
subject: 4
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813851
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813851/suppl/GSM813851.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813852 | GPL570 |
|
Skin_sarc_11NL
|
Sarcoidosis Skin NL subj 11
|
subject: 11
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813852
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813852/suppl/GSM813852.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813853 | GPL570 |
|
Skin_sarc_6NL
|
Sarcoidosis Skin NL subj 6
|
subject: 6
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813853
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813853/suppl/GSM813853.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813854 | GPL570 |
|
Skin_norm_20NL
|
normal Skin NL subj 20
|
subject: 20
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813854
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813854/suppl/GSM813854.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813855 | GPL570 |
|
Skin_norm_16NL
|
normal Skin NL subj 16
|
subject: 16
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813855
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813855/suppl/GSM813855.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813856 | GPL570 |
|
Skin_sarc_13NL
|
Sarcoidosis Skin NL subj 13
|
subject: 13
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813856
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813856/suppl/GSM813856.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813857 | GPL570 |
|
skin_sarc_14NL
|
Sarcoidosis Skin NL subj 14
|
subject: 14
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813857
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813857/suppl/GSM813857.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813858 | GPL570 |
|
skin_sarc_10TL
|
Sarcoidosis Skin TL subj 10
|
subject: 10
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813858
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813858/suppl/GSM813858.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813859 | GPL570 |
|
skin_sarc_13TL
|
Sarcoidosis Skin TL subj 13
|
subject: 13
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813859
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813859/suppl/GSM813859.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813860 | GPL570 |
|
skin_sarc_3NL
|
Sarcoidosis Skin NL subj 3
|
subject: 3
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813860
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813860/suppl/GSM813860.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813861 | GPL570 |
|
skin_sarc_2NL
|
Sarcoidosis Skin NL subj 2
|
subject: 2
phenotype: Skin Non lesion
|
|
| Sample_geo_accession | GSM813861
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813861/suppl/GSM813861.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
|
GSM813862 | GPL570 |
|
skin_sarc_3TL
|
Sarcoidosis Skin TL subj 3
|
subject: 3
phenotype: Skin Lesion
|
|
| Sample_geo_accession | GSM813862
| | Sample_status | Public on Oct 13 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 13 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The amplification protocol was the NuGEN Ovation RNA Amplification System V2 (manufacturer's protocol), purified using Zymo Research DNA Clean and Concentrator-25 Kit columns (using protocol suggested by NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling was done using the NuGEN Encore Biotin Module (manufacturer's protocol).
| | Sample_hyb_protocol | Hybridization were done on Affymetrix GeneChips (U133plus2.0 cartridge arrays) for 16 hours, 48C and 55rpm, then washed on an Affymetrix FS400 instrument using the EukGE-WS2v4_450 protocol.
| | Sample_scan_protocol | Arrays were scanned using an Affymetrix GCS3000 7G system.
| | Sample_data_processing | Data was collected using GCOS (GeneChip Operating System) software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Hongtao,,Fan
| | Sample_contact_email | hfan@cntus.jnj.com
| | Sample_contact_department | RDI
| | Sample_contact_institute | Centocor
| | Sample_contact_address | 145 King of Prussia Rd
| | Sample_contact_city | Radnor
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19087
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813862/suppl/GSM813862.CEL.gz
| | Sample_series_id | GSE32887
| | Sample_data_row_count | 54675
| | |
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