Search results for the GEO ID: GSE32890  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM813909 | GPL1355 |
|
treated ovary A
|
ovary sample after TCDD treatment
|
tissue: ovary
treatment: TCDD
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813909
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813909/suppl/GSM813909_A14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813910 | GPL1355 |
|
treated ovary B
|
ovary sample after TCDD treatment
|
tissue: ovary
treatment: TCDD
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813910
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813910/suppl/GSM813910_B14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813911 | GPL1355 |
|
treated ovary D
|
ovary sample after TCDD treatment
|
tissue: ovary
treatment: TCDD
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813911
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813911/suppl/GSM813911_D14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813912 | GPL1355 |
|
normal ovary i
|
ovary sample untreated
|
tissue: ovary
treatment: untreated
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813912
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813912/suppl/GSM813912_i14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813913 | GPL1355 |
|
normal ovary K
|
ovary sample untreated
|
tissue: ovary
treatment: untreated
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813913
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813913/suppl/GSM813913_K14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813914 | GPL1355 |
|
normal ovary L
|
ovary sample untreated
|
tissue: ovary
treatment: untreated
age: 14 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813914
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813914/suppl/GSM813914_L14_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813915 | GPL1355 |
|
treated testis A
|
testis sample after TCDD treatment
|
tissue: testis
treatment: TCDD
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813915
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813915/suppl/GSM813915_A1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813916 | GPL1355 |
|
treated testis B
|
testis sample after TCDD treatment
|
tissue: testis
treatment: TCDD
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813916
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813916/suppl/GSM813916_B1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813917 | GPL1355 |
|
treated testis D
|
testis sample after TCDD treatment
|
tissue: testis
treatment: TCDD
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813917
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813917/suppl/GSM813917_C1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813918 | GPL1355 |
|
normal testis i
|
testis sample untreated
|
tissue: testis
treatment: untreated
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813918
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813918/suppl/GSM813918_i1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813919 | GPL1355 |
|
normal testis K
|
testis sample untreated
|
tissue: testis
treatment: untreated
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813919
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813919/suppl/GSM813919_J1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
|
GSM813920 | GPL1355 |
|
normal testis L
|
testis sample untreated
|
tissue: testis
treatment: untreated
age: 5 d
strain: Sprague-Dawley
|
|
| Sample_geo_accession | GSM813920
| | Sample_status | Public on Oct 12 2011
| | Sample_submission_date | Oct 11 2011
| | Sample_last_update_date | Oct 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with Rneasy Mini RNA extraction kit (Qiagen), then 250 ng of total RNA were amplified using GeneChip 3' IVT Express Kit from Affymetrix.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix protocol
| | Sample_hyb_protocol | standard Affymetrix protocol
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0
| | Sample_data_processing | CEL files were processed using MAS 5.0 analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1355
| | Sample_contact_name | emmanuelle,,meugnier
| | Sample_contact_email | meugnier@univ-lyon1.fr
| | Sample_contact_institute | INSERMU870/INRA1235
| | Sample_contact_address | Faculté de Médecine Lyon sud
| | Sample_contact_city | oullins
| | Sample_contact_zip/postal_code | 69600
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM813nnn/GSM813920/suppl/GSM813920_L1_Rat230_2_.CEL.gz
| | Sample_series_id | GSE32890
| | Sample_data_row_count | 31099
| | |
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