Search results for the GEO ID: GSE32904  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM814510 | GPL1261 |
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Twist1 + Ras- transgenic mouse derived mammary tumor A
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Mouse Breast cancer tumor
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cell type: Twist1 + Ras- transgenic mouse-derived metaplastic breast tumor
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| Sample_geo_accession | GSM814510
| | Sample_status | Public on Jul 24 2012
| | Sample_submission_date | Oct 12 2011
| | Sample_last_update_date | Jul 24 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with with the Qiagen RNeasy minikit (Qiagen), then 100 ng of total RNA were amplified using Kit GeneChip 3’ IVT Express (Affymetrix).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to manufacturer's instructions (Affymetrix).
| | Sample_hyb_protocol | According to manufacturer's instructions (Affymetrix).
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0.
| | Sample_data_processing | CHP files were processed using RMA analysis algorithm with Affymetrix Expression Console software 1.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | stéphane,,ansieau
| | Sample_contact_email | ansieau@lyon.fnclcc.fr
| | Sample_contact_phone | 0033-478785160
| | Sample_contact_fax | 0033-478782821
| | Sample_contact_department | Centre Léon Bérard
| | Sample_contact_institute | Inserm U590
| | Sample_contact_address | 28 rue Laennec
| | Sample_contact_city | Lyon
| | Sample_contact_zip/postal_code | 69008
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814510/suppl/GSM814510_D376_YUP_110930_Mouse430_2_.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814510/suppl/GSM814510_D376_YUP_110930_Mouse430_2_.rma.chp.gz
| | Sample_series_id | GSE32904
| | Sample_series_id | GSE32905
| | Sample_data_row_count | 45101
| | |
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GSM814511 | GPL1261 |
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Twist1 + Ras- transgenic mouse derived mammary tumor B
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Mouse Breast cancer tumor
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cell type: Twist1 + Ras- transgenic mouse-derived metaplastic breast tumor
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| Sample_geo_accession | GSM814511
| | Sample_status | Public on Jul 24 2012
| | Sample_submission_date | Oct 12 2011
| | Sample_last_update_date | Jul 24 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with with the Qiagen RNeasy minikit (Qiagen), then 100 ng of total RNA were amplified using Kit GeneChip 3’ IVT Express (Affymetrix).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to manufacturer's instructions (Affymetrix).
| | Sample_hyb_protocol | According to manufacturer's instructions (Affymetrix).
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0.
| | Sample_data_processing | CHP files were processed using RMA analysis algorithm with Affymetrix Expression Console software 1.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | stéphane,,ansieau
| | Sample_contact_email | ansieau@lyon.fnclcc.fr
| | Sample_contact_phone | 0033-478785160
| | Sample_contact_fax | 0033-478782821
| | Sample_contact_department | Centre Léon Bérard
| | Sample_contact_institute | Inserm U590
| | Sample_contact_address | 28 rue Laennec
| | Sample_contact_city | Lyon
| | Sample_contact_zip/postal_code | 69008
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814511/suppl/GSM814511_D503UL_YUP_110930_Mouse430_2_.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814511/suppl/GSM814511_D503UL_YUP_110930_Mouse430_2_.rma.chp.gz
| | Sample_series_id | GSE32904
| | Sample_series_id | GSE32905
| | Sample_data_row_count | 45101
| | |
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GSM814512 | GPL1261 |
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Mouse Breast cancer tumor cell line 1
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Mouse Breast cancer tumor cell line
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cell line: luminal MMTV-ErbB2-breast tumor-derived cell line
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| Sample_geo_accession | GSM814512
| | Sample_status | Public on Jul 24 2012
| | Sample_submission_date | Oct 12 2011
| | Sample_last_update_date | Jul 24 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with with the Qiagen RNeasy minikit (Qiagen), then 100 ng of total RNA were amplified using Kit GeneChip 3’ IVT Express (Affymetrix).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to manufacturer's instructions (Affymetrix).
| | Sample_hyb_protocol | According to manufacturer's instructions (Affymetrix).
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0.
| | Sample_data_processing | CHP files were processed using RMA analysis algorithm with Affymetrix Expression Console software 1.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | stéphane,,ansieau
| | Sample_contact_email | ansieau@lyon.fnclcc.fr
| | Sample_contact_phone | 0033-478785160
| | Sample_contact_fax | 0033-478782821
| | Sample_contact_department | Centre Léon Bérard
| | Sample_contact_institute | Inserm U590
| | Sample_contact_address | 28 rue Laennec
| | Sample_contact_city | Lyon
| | Sample_contact_zip/postal_code | 69008
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814512/suppl/GSM814512_Neu8_2_YUP_110930_Mouse430_2_.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814512/suppl/GSM814512_Neu8_2_YUP_110930_Mouse430_2_.rma.chp.gz
| | Sample_series_id | GSE32904
| | Sample_series_id | GSE32905
| | Sample_data_row_count | 45101
| | |
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GSM814513 | GPL1261 |
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Mouse Breast cancer tumor cell line 2
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Mouse Breast cancer tumor cell line
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cell line: luminal MMTV-ErbB2-breast tumor-derived cell line
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| Sample_geo_accession | GSM814513
| | Sample_status | Public on Jul 24 2012
| | Sample_submission_date | Oct 12 2011
| | Sample_last_update_date | Jul 24 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with with the Qiagen RNeasy minikit (Qiagen), then 100 ng of total RNA were amplified using Kit GeneChip 3’ IVT Express (Affymetrix).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to manufacturer's instructions (Affymetrix).
| | Sample_hyb_protocol | According to manufacturer's instructions (Affymetrix).
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0.
| | Sample_data_processing | CHP files were processed using RMA analysis algorithm with Affymetrix Expression Console software 1.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | stéphane,,ansieau
| | Sample_contact_email | ansieau@lyon.fnclcc.fr
| | Sample_contact_phone | 0033-478785160
| | Sample_contact_fax | 0033-478782821
| | Sample_contact_department | Centre Léon Bérard
| | Sample_contact_institute | Inserm U590
| | Sample_contact_address | 28 rue Laennec
| | Sample_contact_city | Lyon
| | Sample_contact_zip/postal_code | 69008
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814513/suppl/GSM814513_Neu15F1_1_YUP_110930_Mouse430_2_.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM814nnn/GSM814513/suppl/GSM814513_Neu15F1_1_YUP_110930_Mouse430_2_.rma.chp.gz
| | Sample_series_id | GSE32904
| | Sample_series_id | GSE32905
| | Sample_data_row_count | 45101
| | |
|
GSM879437 | GPL1261 |
|
Twist1 + Ras- transgenic mouse derived mammary tumor C
|
Mouse Breast cancer tumor
|
cell type: Twist1 + Ras- transgenic mouse-derived metaplastic breast tumor
|
|
| Sample_geo_accession | GSM879437
| | Sample_status | Public on Jul 24 2012
| | Sample_submission_date | Feb 23 2012
| | Sample_last_update_date | Jul 24 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA were extract with with the Qiagen RNeasy minikit (Qiagen), then 100 ng of total RNA were amplified using Kit GeneChip 3’ IVT Express (Affymetrix).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to manufacturer's instructions (Affymetrix).
| | Sample_hyb_protocol | According to manufacturer's instructions (Affymetrix).
| | Sample_scan_protocol | The Arrays were scanned using the Gene Chip Scanner 3000. Then CEL files were generated using the Affymetrix GeneChip Command Console software (AGCC) 3.0.
| | Sample_data_processing | CHP files were processed using RMA analysis algorithm with Affymetrix Expression Console software 1.1
| | Sample_platform_id | GPL1261
| | Sample_contact_name | stéphane,,ansieau
| | Sample_contact_email | ansieau@lyon.fnclcc.fr
| | Sample_contact_phone | 0033-478785160
| | Sample_contact_fax | 0033-478782821
| | Sample_contact_department | Centre Léon Bérard
| | Sample_contact_institute | Inserm U590
| | Sample_contact_address | 28 rue Laennec
| | Sample_contact_city | Lyon
| | Sample_contact_zip/postal_code | 69008
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879437/suppl/GSM879437_V144_Morel_120221_Mouse430_2_.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879437/suppl/GSM879437_V144_Morel_120221_Mouse430_2_.rma.chp.gz
| | Sample_series_id | GSE32904
| | Sample_series_id | GSE32905
| | Sample_data_row_count | 45101
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