Search results for the GEO ID: GSE32967 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM816546 | GPL570 |
|
prostatecancer_xenograft_MDAPCa79_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_79.1
|
Sample_geo_accession | GSM816546
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816546/suppl/GSM816546_AA001_601_AGE_1_AA001_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816547 | GPL570 |
|
prostatecancer_xenograft_MDAPCa79_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_79.2
|
Sample_geo_accession | GSM816547
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816547/suppl/GSM816547_AA001_601_AGE_1_AA002_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816548 | GPL570 |
|
prostatecancer_xenograft_MDAPCa79_rep3
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_79.3
|
Sample_geo_accession | GSM816548
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816548/suppl/GSM816548_AA001_601_AGE_1_AA003_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816549 | GPL570 |
|
prostatecancer_xenograft_MDAPCa117-9_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_117-9.1
|
Sample_geo_accession | GSM816549
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816549/suppl/GSM816549_AA001_601_AGE_1_AA004_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816550 | GPL570 |
|
prostatecancer_xenograft_MDAPCa117-9_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_117-9.2
|
Sample_geo_accession | GSM816550
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816550/suppl/GSM816550_AA001_601_AGE_1_AA005_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816551 | GPL570 |
|
prostatecancer_xenograft_MDAPCa117-9_rep3
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_117-9.3
|
Sample_geo_accession | GSM816551
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816551/suppl/GSM816551_AA001_601_AGE_1_AA006_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816552 | GPL570 |
|
prostatecancer_xenograft_MDAPCa130_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_130.1
|
Sample_geo_accession | GSM816552
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816552/suppl/GSM816552_AA001_601_AGE_1_AA007_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816553 | GPL570 |
|
prostatecancer_xenograft_MDAPCa130_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: adenocarcinoma
|
MDA_PCa_130.2
|
Sample_geo_accession | GSM816553
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816553/suppl/GSM816553_AA001_601_AGE_1_AA008_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816554 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-4_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: large cell neuroendocrine carcinoma
|
MDA_PCa_144-4.1
|
Sample_geo_accession | GSM816554
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816554/suppl/GSM816554_AA001_601_AGE_1_AA016_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816555 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-4_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: large cell neuroendocrine carcinoma
|
MDA_PCa_144-4.2
|
Sample_geo_accession | GSM816555
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816555/suppl/GSM816555_AA001_601_AGE_1_AA017_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816556 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-4_rep3
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: large cell neuroendocrine carcinoma
|
MDA_PCa_144-4.3
|
Sample_geo_accession | GSM816556
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816556/suppl/GSM816556_AA001_601_AGE_1_AA018_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816557 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-4_rep4
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: large cell neuroendocrine carcinoma
|
MDA_PCa_144-4.4
|
Sample_geo_accession | GSM816557
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816557/suppl/GSM816557_AA001_601_AGE_1_AA019_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816558 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-4_rep5
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: large cell neuroendocrine carcinoma
|
MDA_PCa_144-4.5
|
Sample_geo_accession | GSM816558
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816558/suppl/GSM816558_AA001_601_AGE_1_AA020_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816559 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-13_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_144-13.1
|
Sample_geo_accession | GSM816559
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816559/suppl/GSM816559_AA001_601_AGE_1_AA011_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816560 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-13_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_144-13.2
|
Sample_geo_accession | GSM816560
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816560/suppl/GSM816560_AA001_601_AGE_1_AA012_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816561 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-13_rep3
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_144-13.3
|
Sample_geo_accession | GSM816561
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816561/suppl/GSM816561_AA001_601_AGE_1_AA013_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816562 | GPL570 |
|
prostatecancer_xenograft_MDAPCa144-13_rep4
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_144-13.4
|
Sample_geo_accession | GSM816562
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816562/suppl/GSM816562_AA001_601_AGE_1_AA014_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816563 | GPL570 |
|
prostatecancer_xenograft_MDAPCa146-10_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_146-10.1
|
Sample_geo_accession | GSM816563
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816563/suppl/GSM816563_AA001_601_AGE_1_AA021_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816564 | GPL570 |
|
prostatecancer_xenograft_MDAPCa146-10_rep2
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_146-10.2
|
Sample_geo_accession | GSM816564
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816564/suppl/GSM816564_AA001_601_AGE_1_AA022_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816565 | GPL570 |
|
prostatecancer_xenograft_MDAPCa146-10_rep3
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_146-10.3
|
Sample_geo_accession | GSM816565
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816565/suppl/GSM816565_AA001_601_AGE_1_AA023_11_05_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816566 | GPL570 |
|
prostatecancer_xenograft_MDAPCa155-2_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_155-2.1
|
Sample_geo_accession | GSM816566
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816566/suppl/GSM816566_AA001_601_AGE_1_AA009_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
GSM816567 | GPL570 |
|
prostatecancer_xenograft_MDAPCa155-12_rep1
|
xenografted prostate cancer grown subcutaneously in the flanks of CB17 SCID intact mice
|
tissue: prostate cancer
tumor stage: castration-resistant prostate cancer (CRPC)
histologic type: small cell carcinoma
|
MDA_PCa_155-12.1
|
Sample_geo_accession | GSM816567
| Sample_status | Public on Jan 01 2012
| Sample_submission_date | Oct 13 2011
| Sample_last_update_date | Jan 01 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | tumors were grown subcutaneously in the flanks of CB17 SCID intact mice
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The RNeasy mini kit (Qiagen, Inc. Valencia, CA) was used for total RNA extraction
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | ENZO BioArray High Yield RNA Transcript Labeling Kit
| Sample_hyb_protocol | Hydrization was done with fragmented cRNA with herring sperm DNA, acetylated BSA in a buffer at 45 oC for overnight with rotation using GeneChip Fuidics station
| Sample_scan_protocol | GeneArray Scanne using Microarray Suit software
| Sample_data_processing | We used RMA (Robust Multichip Analysis) for the normalization and quantification of the data.
| Sample_platform_id | GPL570
| Sample_contact_name | Jiexin,,Zhang
| Sample_contact_institute | UT MD Anderson Cancer Center
| Sample_contact_address | 1515 Holcombe Blvd
| Sample_contact_city | Houston
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM816nnn/GSM816567/suppl/GSM816567_AA001_601_AGE_1_AA010_11_04_08.CEL.gz
| Sample_series_id | GSE32967
| Sample_series_id | GSE33054
| Sample_data_row_count | 54675
| |
|
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Select GSMs and click on "Add groups" |
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