Search results for the GEO ID: GSE33425  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM825517 | GPL570 |
|
CD161++CD8aa, biological rep 1
|
Ex-vivo CD161++CD8aa T cells
|
tissue: peripheral blood
cell type: CD161++CD8aa T cells
disease state: healthy
|
Gene expression data from CD161++CD8aa T cells.
|
| Sample_geo_accession | GSM825517
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825517/suppl/GSM825517.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825518 | GPL570 |
|
CD161++CD8ab, biological rep 1
|
Ex-vivo CD161++CD8ab T cells
|
tissue: peripheral blood
cell type: CD161++CD8ab T cells
disease state: healthy
|
Gene expression data from CD161++CD8ab T cells.
|
| Sample_geo_accession | GSM825518
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825518/suppl/GSM825518.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825519 | GPL570 |
|
CD161++CD8aa, biological rep 2
|
Ex-vivo CD161++CD8aa T cells
|
tissue: peripheral blood
cell type: CD161++CD8aa T cells
disease state: healthy
|
Gene expression data from CD161++CD8aa T cells.
|
| Sample_geo_accession | GSM825519
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825519/suppl/GSM825519.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825520 | GPL570 |
|
CD161++CD8ab, biological rep 2
|
Ex-vivo CD161++CD8ab T cells
|
tissue: peripheral blood
cell type: CD161++CD8ab T cells
disease state: healthy
|
Gene expression data from CD161++CD8ab T cells.
|
| Sample_geo_accession | GSM825520
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825520/suppl/GSM825520.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825521 | GPL570 |
|
CD161++CD8aa, biological rep 3
|
Ex-vivo CD161++CD8aa T cells
|
tissue: peripheral blood
cell type: CD161++CD8aa T cells
disease state: healthy
|
Gene expression data from CD161++CD8aa T cells.
|
| Sample_geo_accession | GSM825521
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825521/suppl/GSM825521.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825522 | GPL570 |
|
CD161++CD8ab, biological rep 3
|
Ex-vivo CD161++CD8ab T cells
|
tissue: peripheral blood
cell type: CD161++CD8ab T cells
disease state: healthy
|
Gene expression data from CD161++CD8ab T cells.
|
| Sample_geo_accession | GSM825522
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825522/suppl/GSM825522.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825523 | GPL570 |
|
CD161++CD8aa, biological rep 4
|
Ex-vivo CD161++CD8aa T cells
|
tissue: peripheral blood
cell type: CD161++CD8aa T cells
disease state: healthy
|
Gene expression data from CD161++CD8aa T cells.
|
| Sample_geo_accession | GSM825523
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825523/suppl/GSM825523.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM825524 | GPL570 |
|
CD161++CD8ab, biological rep 4
|
Ex-vivo CD161++CD8ab T cells
|
tissue: peripheral blood
cell type: CD161++CD8ab T cells
disease state: healthy
|
Gene expression data from CD161++CD8ab T cells.
|
| Sample_geo_accession | GSM825524
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 01 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the RNeasy mini extraction kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the Affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader.
| | Sample_data_processing | Raw data was analyzed using R and Bioconductor packages to generate RMA-normalized intensities.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM825nnn/GSM825524/suppl/GSM825524.CEL.gz
| | Sample_series_id | GSE33374
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826755 | GPL570 |
|
CD161++CD8+ T cells, biological repeat 1
|
Cord blood Ex-vivo CD161++CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161++CD8+ T cells
|
Gene expression data from human cord blood CD161++CD8+ T cells
|
| Sample_geo_accession | GSM826755
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826755/suppl/GSM826755.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826756 | GPL570 |
|
CD161+CD8+ T cells, biological repeat 1
|
Cord blood Ex-vivo CD161+CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161+CD8+ T cells
|
Gene expression data from human cord blood CD161+CD8+ T cells
|
| Sample_geo_accession | GSM826756
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826756/suppl/GSM826756.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826757 | GPL570 |
|
CD161-CD8+ T cells, biological repeat 1
|
Cord blood Ex-vivo CD161-CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161-CD8+ T cells
|
Gene expression data from human cord blood CD161-CD8+ T cells
|
| Sample_geo_accession | GSM826757
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826757/suppl/GSM826757.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826758 | GPL570 |
|
CD161++CD8+ T cells, biological repeat 2
|
Cord blood Ex-vivo CD161++CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161++CD8+ T cells
|
Gene expression data from human cord blood CD161++CD8+ T cells
|
| Sample_geo_accession | GSM826758
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826758/suppl/GSM826758.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826759 | GPL570 |
|
CD161+CD8+ T cells, biological repeat 2
|
Cord blood Ex-vivo CD161+CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161+CD8+ T cells
|
Gene expression data from human cord blood CD161+CD8+ T cells
|
| Sample_geo_accession | GSM826759
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826759/suppl/GSM826759.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826760 | GPL570 |
|
CD161-CD8+ T cells, biological repeat 2
|
Cord blood Ex-vivo CD161-CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161-CD8+ T cells
|
Gene expression data from human cord blood CD161-CD8+ T cells
|
| Sample_geo_accession | GSM826760
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826760/suppl/GSM826760.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826761 | GPL570 |
|
CD161++CD8+ T cells, biological repeat 3
|
Cord blood Ex-vivo CD161++CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161++CD8+ T cells
|
Gene expression data from human cord blood CD161++CD8+ T cells
|
| Sample_geo_accession | GSM826761
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826761/suppl/GSM826761.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826762 | GPL570 |
|
CD161+CD8+ T cells, biological repeat 3
|
Cord blood Ex-vivo CD16+-CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD16+-CD8+ T cells
|
Gene expression data from human cord blood CD161+CD8+ T cells
|
| Sample_geo_accession | GSM826762
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826762/suppl/GSM826762.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
|
GSM826763 | GPL570 |
|
CD161-CD8+ T cells, biological repeat 3
|
Cord blood Ex-vivo CD161-CD8+ T cells
|
tissue: CD8+ T cell
cell subtype: CD161-CD8+ T cells
|
Gene expression data from human cord blood CD161-CD8+ T cells
|
| Sample_geo_accession | GSM826763
| | Sample_status | Public on Jan 25 2012
| | Sample_submission_date | Nov 02 2011
| | Sample_last_update_date | Jan 25 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy mini extraction kit (Qiagen) according to the manufacturers instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA were prepared according to the Ovation Pico WTA system (Nugen) protocol.
| | Sample_hyb_protocol | Following fragmentation, 5ug of biotinylated cDNA was hybridized to GeneChip Human Genome U133 Plus 2.0 arrays (Affymetrix) for 18 hrs at 45C and stained in the affymetrix 3 GeneChip® Fluidics Stations F450.
| | Sample_scan_protocol | GeneChip® Scanner 3000 7G with autoloader
| | Sample_data_processing | R and Bioconductor packages were used for processing and analysing raw data, to generate RMA normalised intensities
| | Sample_platform_id | GPL570
| | Sample_contact_name | Natasha,,Sahgal
| | Sample_contact_institute | Wellcome Trust Centre for Human Genetics, University Of Oxford
| | Sample_contact_address | Roosevelt Drive
| | Sample_contact_city | Oxford
| | Sample_contact_zip/postal_code | OX3 7BN
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM826nnn/GSM826763/suppl/GSM826763.CEL.gz
| | Sample_series_id | GSE33424
| | Sample_series_id | GSE33425
| | Sample_data_row_count | 54675
| | |
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