Search results for the GEO ID: GSE33471  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM828120 | GPL1261 |
|
TßRII-Het Hair Germ set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: quiescent HG HFSCs
|
Gene expression data from quiescent HG HFSCs
|
| Sample_geo_accession | GSM828120
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828120/suppl/GSM828120.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828121 | GPL1261 |
|
TßRII-Het Bugle set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: quiescent bulge HFSCs
|
Gene expression data from quiescent bulge HFSCs
|
| Sample_geo_accession | GSM828121
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828121/suppl/GSM828121.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828122 | GPL1261 |
|
TßRII-Het Total skin keratinocytes set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: total skin keratinocytes
|
Gene expression data from total skin keratinocytes
|
| Sample_geo_accession | GSM828122
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828122/suppl/GSM828122.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828123 | GPL1261 |
|
TßRII-cKO Hair Germ set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: quiescent HG HFSCs
|
Gene expression data from quiescent HG HFSCs
|
| Sample_geo_accession | GSM828123
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828123/suppl/GSM828123.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828124 | GPL1261 |
|
TßRII-cKO Bugle set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: quiescent bulge HFSCs
|
Gene expression data from quiescent bulge HFSCs
|
| Sample_geo_accession | GSM828124
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828124/suppl/GSM828124.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828125 | GPL1261 |
|
TßRII-cKO Total skin keratinocytes set #1
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: total skin keratinocytes
|
Gene expression data from total skin keratinocytes
|
| Sample_geo_accession | GSM828125
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828125/suppl/GSM828125.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828126 | GPL1261 |
|
TßRII-Het Hair Germ set #2
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: activated HG HFSCs
|
Gene expression data from activated HG HFSCs
|
| Sample_geo_accession | GSM828126
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828126/suppl/GSM828126.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828127 | GPL1261 |
|
TßRII-Het Bugle set #2
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: activated bulge HFSCs
|
Gene expression data from activated bulge HFSCs
|
| Sample_geo_accession | GSM828127
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828127/suppl/GSM828127.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828128 | GPL1261 |
|
TßRII-Het Total skin keratinocytes set #2
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-Het
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: total skin keratinocytes
|
Gene expression data from total skin keratinocytes
|
| Sample_geo_accession | GSM828128
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828128/suppl/GSM828128.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828129 | GPL1261 |
|
TßRII-cKO Hair Germ set #2
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: aberrantly quiescent HG HFSCs in TßRII-cKO mice
|
Gene expression data from aberrantly quiescent HG HFSCs in TßRII-cKO mice
|
| Sample_geo_accession | GSM828129
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828129/suppl/GSM828129.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
| | |
|
GSM828130 | GPL1261 |
|
TßRII-cKO Bugle set #2
|
Mouse back skins
|
gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: aberrantly quiescent bulge HFSCs in TßRII-cKO mice
|
Gene expression data from aberrantly quiescent bulge HFSCs in TßRII-cKO mice
|
| Sample_geo_accession | GSM828130
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828130/suppl/GSM828130.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
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GSM828131 | GPL1261 |
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TßRII-cKO Total skin keratinocytes set #2
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Mouse back skins
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gender: Female
age: P72-74
strain: mixed C57BL/6 and CD1
genotype/variation: TßRII-cKO
sorting markers: Rosa26-YFP, P-cadherin, CD34
cell type: total skin keratinocytes
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Gene expression data from total skin keratinocytes
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| Sample_geo_accession | GSM828131
| | Sample_status | Public on Jan 04 2012
| | Sample_submission_date | Nov 03 2011
| | Sample_last_update_date | Jan 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | HG and bulge HFSCs and Rosa26YFP+ total skin keratinocytes were FACS-purifed from the back skins of indicated ages of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix 3000 7G Scanner.
| | Sample_data_processing | The data were analyzed with MAS5.0 method using Gene Pattern analysis settings and median scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Naoki,,Oshimori
| | Sample_contact_email | noshimori@rockefeller.edu
| | Sample_contact_laboratory | Laboratory of Mammalian Cell Biology and Development
| | Sample_contact_institute | HHMI/The Rockefeller University
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM828nnn/GSM828131/suppl/GSM828131.CEL.gz
| | Sample_series_id | GSE33471
| | Sample_data_row_count | 45101
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