Search results for the GEO ID: GSE33897  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM838522 | GPL1261 |
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K7M2/GFP
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K7M2 cell line
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cell line: K7M2
overexpression: GFP
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| Sample_geo_accession | GSM838522
| | Sample_status | Public on Mar 14 2012
| | Sample_submission_date | Nov 22 2011
| | Sample_last_update_date | Mar 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Cells were grown in DMEM medium + 10%FBS at 37 degree with 5% CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA is extracted using Qiagen RNA mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix one-cycle eukaryotic target labeling assay protocol
| | Sample_hyb_protocol | Biotinylated fragmented cRNA was hybridized to GeneChip® Mouse Genome 430 2.0 for 16 hours according to the standard Affymetrix protocol
| | Sample_scan_protocol | Affymetrix genechip scanner 3000 was used
| | Sample_data_processing | The .CEL file was exported from Affymetrix AGCC software and the data was processed with RMA using Affymetrix Power Tool
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Chand,,Khanna
| | Sample_contact_email | khannac@mail.nih.gov
| | Sample_contact_laboratory | Tumor and Metastasis Biology Section
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | NCI
| | Sample_contact_address | 37 Convent Drive, Suite 2144
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM838nnn/GSM838522/suppl/GSM838522_GFP.CEL.gz
| | Sample_series_id | GSE33897
| | Sample_data_row_count | 45101
| | |
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GSM838523 | GPL1261 |
|
K7M2/ezrinT567A-GFP rep1
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K7M2 cell line
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cell line: K7M2
overexpression: ezrinT567A-GFP
|
|
| Sample_geo_accession | GSM838523
| | Sample_status | Public on Mar 14 2012
| | Sample_submission_date | Nov 22 2011
| | Sample_last_update_date | Mar 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Cells were grown in DMEM medium + 10%FBS at 37 degree with 5% CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA is extracted using Qiagen RNA mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix one-cycle eukaryotic target labeling assay protocol
| | Sample_hyb_protocol | Biotinylated fragmented cRNA was hybridized to GeneChip® Mouse Genome 430 2.0 for 16 hours according to the standard Affymetrix protocol
| | Sample_scan_protocol | Affymetrix genechip scanner 3000 was used
| | Sample_data_processing | The .CEL file was exported from Affymetrix AGCC software and the data was processed with RMA using Affymetrix Power Tool
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Chand,,Khanna
| | Sample_contact_email | khannac@mail.nih.gov
| | Sample_contact_laboratory | Tumor and Metastasis Biology Section
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | NCI
| | Sample_contact_address | 37 Convent Drive, Suite 2144
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM838nnn/GSM838523/suppl/GSM838523_T567A-GFP.rep1.CEL.gz
| | Sample_series_id | GSE33897
| | Sample_data_row_count | 45101
| | |
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GSM838524 | GPL1261 |
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K7M2/ezrinT567A-GFP rep2
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K7M2 cell line
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cell line: K7M2
overexpression: ezrinT567A-GFP
|
|
| Sample_geo_accession | GSM838524
| | Sample_status | Public on Mar 14 2012
| | Sample_submission_date | Nov 22 2011
| | Sample_last_update_date | Mar 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Cells were grown in DMEM medium + 10%FBS at 37 degree with 5% CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA is extracted using Qiagen RNA mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix one-cycle eukaryotic target labeling assay protocol
| | Sample_hyb_protocol | Biotinylated fragmented cRNA was hybridized to GeneChip® Mouse Genome 430 2.0 for 16 hours according to the standard Affymetrix protocol
| | Sample_scan_protocol | Affymetrix genechip scanner 3000 was used
| | Sample_data_processing | The .CEL file was exported from Affymetrix AGCC software and the data was processed with RMA using Affymetrix Power Tool
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Chand,,Khanna
| | Sample_contact_email | khannac@mail.nih.gov
| | Sample_contact_laboratory | Tumor and Metastasis Biology Section
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | NCI
| | Sample_contact_address | 37 Convent Drive, Suite 2144
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM838nnn/GSM838524/suppl/GSM838524_T567A-GFP.rep2.CEL.gz
| | Sample_series_id | GSE33897
| | Sample_data_row_count | 45101
| | |
|
GSM838525 | GPL1261 |
|
K7M2/ezrinT567A-GFP rep3
|
K7M2 cell line
|
cell line: K7M2
overexpression: ezrinT567A-GFP
|
|
| Sample_geo_accession | GSM838525
| | Sample_status | Public on Mar 14 2012
| | Sample_submission_date | Nov 22 2011
| | Sample_last_update_date | Mar 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Cells were grown in DMEM medium + 10%FBS at 37 degree with 5% CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA is extracted using Qiagen RNA mini kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix one-cycle eukaryotic target labeling assay protocol
| | Sample_hyb_protocol | Biotinylated fragmented cRNA was hybridized to GeneChip® Mouse Genome 430 2.0 for 16 hours according to the standard Affymetrix protocol
| | Sample_scan_protocol | Affymetrix genechip scanner 3000 was used
| | Sample_data_processing | The .CEL file was exported from Affymetrix AGCC software and the data was processed with RMA using Affymetrix Power Tool
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Chand,,Khanna
| | Sample_contact_email | khannac@mail.nih.gov
| | Sample_contact_laboratory | Tumor and Metastasis Biology Section
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | NCI
| | Sample_contact_address | 37 Convent Drive, Suite 2144
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM838nnn/GSM838525/suppl/GSM838525_T567A-GFP.rep3.CEL.gz
| | Sample_series_id | GSE33897
| | Sample_data_row_count | 45101
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