Search results for the GEO ID: GSE34629  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM852167 | GPL1261 |
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WT_0
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LPAR1 wild-type, 0 minutes
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cell line: NIH3T3 Cells
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Gene expression of NIH3T3 cells with wild-type LPAR1
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| Sample_geo_accession | GSM852167
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852167/suppl/GSM852167.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
| | |
|
GSM852168 | GPL1261 |
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WT_60
|
LPAR1 wild-type, 60 mintues
|
cell line: NIH3T3 Cells
|
Gene expression of NIH3T3 cells with wild-type LPAR1
|
| Sample_geo_accession | GSM852168
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852168/suppl/GSM852168.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
| | |
|
GSM852169 | GPL1261 |
|
WT_120
|
LPAR1 wild-type, 120 mintues
|
cell line: NIH3T3 Cells
|
Gene expression of NIH3T3 cells with wild-type LPAR1
|
| Sample_geo_accession | GSM852169
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852169/suppl/GSM852169.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
| | |
|
GSM852170 | GPL1261 |
|
MT_0
|
LPAR1 mutant, 0 minutes
|
cell line: NIH3T3 Cells
|
Gene expression of NIH3T3 cells with mutant LPAR1
|
| Sample_geo_accession | GSM852170
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852170/suppl/GSM852170.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
| | |
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GSM852171 | GPL1261 |
|
MT_60
|
LPAR1 mutant, 60 mintues
|
cell line: NIH3T3 Cells
|
Gene expression of NIH3T3 cells with mutant LPAR1
|
| Sample_geo_accession | GSM852171
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852171/suppl/GSM852171.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
| | |
|
GSM852172 | GPL1261 |
|
MT_120
|
LPAR1 mutant, 120 mintues
|
cell line: NIH3T3 Cells
|
Gene expression of NIH3T3 cells with mutant LPAR1
|
| Sample_geo_accession | GSM852172
| | Sample_status | Public on Dec 22 2012
| | Sample_submission_date | Dec 21 2011
| | Sample_last_update_date | Dec 22 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted as previously described by Wei et al in Cancer Res. 64: 6883-91, 2004.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to Affymetrix protocol
| | Sample_hyb_protocol | According to Affymetrix protocol
| | Sample_scan_protocol | Arrays were scanned with GeneChip Scanner 3000 following Affymetrix protocol
| | Sample_data_processing | Data were normalized with PLIER via apt-probeset-summarize 'plier-mm' (Affymetrix Power Tools v1.14.3.1) and further log-transformed to base 2
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Peter,,Johansson
| | Sample_contact_email | johanssonp@mail.nih.gov
| | Sample_contact_laboratory | Oncogenomics
| | Sample_contact_department | Pediatric Oncology Branch
| | Sample_contact_institute | National Cancer Institute
| | Sample_contact_address | 8717 Grovemont Circle
| | Sample_contact_city | Gaithersburg
| | Sample_contact_state | Maryland
| | Sample_contact_zip/postal_code | 20877
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM852nnn/GSM852172/suppl/GSM852172.CEL.gz
| | Sample_series_id | GSE34629
| | Sample_data_row_count | 45101
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