Search results for the GEO ID: GSE34839  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM856048 | GPL1261 |
|
Pb-Cre+;PtenL/W;K-rasG12D/W, biological rep1
|
murine Pb-Cre+;PtenL/W;K-rasG12D/W prostate
|
tissue: prostate tumor
genotype: Pb-Cre+;PtenL/W;K-rasG12D/W
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856048
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856048/suppl/GSM856048_1.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
| | |
|
GSM856049 | GPL1261 |
|
Pb-Cre+;PtenL/W;K-rasG12D/W, biological rep2
|
murine Pb-Cre+;PtenL/W;K-rasG12D/W prostate
|
tissue: prostate tumor
genotype: Pb-Cre+;PtenL/W;K-rasG12D/W
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856049
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856049/suppl/GSM856049_4.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
| | |
|
GSM856050 | GPL1261 |
|
Pb-Cre+;PtenL/W;K-rasG12D/W, biological rep3
|
murine Pb-Cre+;PtenL/W;K-rasG12D/W prostate
|
tissue: prostate tumor
genotype: Pb-Cre+;PtenL/W;K-rasG12D/W
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856050
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856050/suppl/GSM856050_71.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
| | |
|
GSM856051 | GPL1261 |
|
Pten null, biological rep1
|
murine Pten null prostate
|
tissue: prostate tumor
genotype: Pten null
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856051
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856051/suppl/GSM856051_13.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
| | |
|
GSM856052 | GPL1261 |
|
Pten null, biological rep2
|
murine Pten null prostate
|
tissue: prostate tumor
genotype: Pten null
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856052
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856052/suppl/GSM856052_67.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
| | |
|
GSM856053 | GPL1261 |
|
Pten null, biological rep3
|
murine Pten null prostate
|
tissue: prostate tumor
genotype: Pten null
age: older than 20 weeks
|
Gene expression data from murine prostate tumor
|
| Sample_geo_accession | GSM856053
| | Sample_status | Public on Feb 28 2012
| | Sample_submission_date | Jan 04 2012
| | Sample_last_update_date | Feb 28 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using the miRNeasy Mini Kit (Qiagen) per manufacturer's instruction
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | As recommended by manufacturer
| | Sample_hyb_protocol | As recommended by manufacturer
| | Sample_scan_protocol | GeneChip Scanner 3000 7G was used for scanning. Affymetrix GeneChip Command Console software (AGCC 3.2) was used for image processing
| | Sample_data_processing | Data was normalized by RMA (R/Bioconductor).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Linh,My,Tran
| | Sample_contact_email | linhtran@ucla.edu
| | Sample_contact_laboratory | Hong Wu
| | Sample_contact_department | 1Department of Molecular and Medical Pharmacology
| | Sample_contact_institute | University of Los Angeles
| | Sample_contact_address | 650 CE Young Drive South
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | California
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM856nnn/GSM856053/suppl/GSM856053_76.CEL.gz
| | Sample_series_id | GSE34839
| | Sample_data_row_count | 45101
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