Search results for the GEO ID: GSE35106  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM862150 | GPL1261 |
|
GV-stage oocyte, biological rep 1
|
polysome-bound transcripts from mouse GV-stage oocytes
|
tissue: oocyte
oocyte stage: germinal vesicle (GV)
|
pGV 1
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862150
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862150/suppl/GSM862150.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862151 | GPL1261 |
|
GV-stage oocyte, biological rep 2
|
polysome-bound transcripts from mouse GV-stage oocytes
|
tissue: oocyte
oocyte stage: germinal vesicle (GV)
|
pGV 2
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862151
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862151/suppl/GSM862151.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862152 | GPL1261 |
|
GV-stage oocyte, biological rep 3
|
polysome-bound transcripts from mouse GV-stage oocytes
|
tissue: oocyte
oocyte stage: germinal vesicle (GV)
|
pGV 3
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862152
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862152/suppl/GSM862152.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862153 | GPL1261 |
|
MI-stage oocyte, biological rep 1
|
polysome-bound transcripts from mouse MI-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase I (MI)
|
pGVB 1
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862153
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862153/suppl/GSM862153.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862154 | GPL1261 |
|
MI-stage oocyte, biological rep 2
|
polysome-bound transcripts from mouse MI-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase I (MI)
|
pGVB 2
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862154
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862154/suppl/GSM862154.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862155 | GPL1261 |
|
MI-stage oocyte, biological rep 3
|
polysome-bound transcripts from mouse MI-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase I (MI)
|
pGVB 3
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862155
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862155/suppl/GSM862155.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862156 | GPL1261 |
|
MII-stage oocytes, biological rep 1
|
polysome-bound transcripts from mouse MII-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase II (MII)
|
pMII 1
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862156
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862156/suppl/GSM862156.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862157 | GPL1261 |
|
MII-stage oocytes, biological rep 2
|
polysome-bound transcripts from mouse MII-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase II (MII)
|
pMII 2
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862157
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862157/suppl/GSM862157.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
| | |
|
GSM862158 | GPL1261 |
|
MII-stage oocytes, biological rep 3
|
polysome-bound transcripts from mouse MII-stage oocytes
|
tissue: oocyte
oocyte stage: metaphase II (MII)
|
pMII 3
Polysome-bound mRNA.
|
| Sample_geo_accession | GSM862158
| | Sample_status | Public on Jan 14 2012
| | Sample_submission_date | Jan 13 2012
| | Sample_last_update_date | Jan 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Forty-eight hours (h) after pregnant mare's serum gonadotropin (PMSG) injection, mice were stimulated with human chorionic gonadotrophin (hCG) for 0, 4, or 14 h, and GV-, MI- and MII-stage oocytes were collected.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Polysome-bound mRNAs were purified using the RNeasy Plus Micro kit (Qiagen), and then reverse-transcribed and linearly amplified with the WT-Ovation FFPE RNA Amplification System V2 (NuGEN).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA was fragmented and labeled using the NuGEN WT-Ovation FFPE System & Encore Biotin Module.
| | Sample_hyb_protocol | Hybridization was performed following the GeneChip Expression Analysis Technical Manual 702232 Rev. 2.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GCS3000 microarray system.
| | Sample_data_processing | The data were analyzed with dChip using default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jing,,Chen
| | Sample_contact_email | chenjl@obgyn.ucsf.edu
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 513 Parnassus Ave. HSW 1456
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862158/suppl/GSM862158.CEL.gz
| | Sample_series_id | GSE35106
| | Sample_data_row_count | 45101
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