Search results for the GEO ID: GSE35160  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM862835 | GPL1261 |
|
transgene strong 1
|
whole skin
|
genotype: tg/g
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
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| Sample_geo_accession | GSM862835
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862835/suppl/GSM862835.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
| | |
|
GSM862836 | GPL1261 |
|
transgene strong 2
|
whole skin
|
genotype: tg/g
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
|
|
| Sample_geo_accession | GSM862836
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862836/suppl/GSM862836.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
| | |
|
GSM862837 | GPL1261 |
|
transgene strong 3
|
whole skin
|
genotype: tg/g
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
|
|
| Sample_geo_accession | GSM862837
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862837/suppl/GSM862837.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
| | |
|
GSM862838 | GPL1261 |
|
wildtype strong 1
|
whole skin
|
genotype: tg/wt
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
|
|
| Sample_geo_accession | GSM862838
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862838/suppl/GSM862838.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
| | |
|
GSM862839 | GPL1261 |
|
wildtype strong 2
|
whole skin
|
genotype: tg/wt
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
|
|
| Sample_geo_accession | GSM862839
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862839/suppl/GSM862839.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
| | |
|
GSM862840 | GPL1261 |
|
wildtype strong 3
|
whole skin
|
genotype: tg/wt
treatment: CaNrf2
gender: female
background strain: FVB/N/C57BL/6 mixed
|
|
| Sample_geo_accession | GSM862840
| | Sample_status | Public on Feb 01 2012
| | Sample_submission_date | Jan 17 2012
| | Sample_last_update_date | Feb 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | 3 female K5cre-caNrf2 (tg/tg) and 3 female K5cre-wt (tg/wt) mice of one litter were sacrificed at P2.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | back skin was cut out and snap frozen in N2, RNA was extracted using GSCN and phenol/chloroform
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 2 ug total RNA using Affymetrix GeneChip One-Cycle Target Labeling and Control Reagents according to the manufacturer’s protocol.
| | Sample_hyb_protocol | 10 μg of cRNA/sample were hybridized for 16 h at 45°C. Washing and staining with streptavidin-conjugated phycoerythrin were done using a GeneChip Fluidics Station 400 (Affymetrix).
| | Sample_scan_protocol | Standard Affymetrix procedures using a Hewlett-Packard scanner
| | Sample_data_processing | Raw gene expression data generated by the GeneChip Operating Software (Affymetrix) were normalized for all probe sets on the array using the Robust Multichip Average (RMA) method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthias,,Schäfer
| | Sample_contact_email | matthias.schaefer@cell.biol.ethz.ch
| | Sample_contact_phone | +41-44-633 3406
| | Sample_contact_fax | +41-44-633 1174
| | Sample_contact_laboratory | Werner
| | Sample_contact_department | Department of Cell Biology
| | Sample_contact_institute | ETH Zürich
| | Sample_contact_address | Schafmattstrasse 18
| | Sample_contact_city | Zürich
| | Sample_contact_state | ZH
| | Sample_contact_zip/postal_code | 8093
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM862nnn/GSM862840/suppl/GSM862840.CEL.gz
| | Sample_series_id | GSE35160
| | Sample_data_row_count | 45101
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