Search results for the GEO ID: GSE35435  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM868293 | GPL1261 |
|
Resting Macrophages M0 BMMF-1
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: none
replicate: 1
|
Replicate 1
|
| Sample_geo_accession | GSM868293
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868293/suppl/GSM868293.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
|
GSM868294 | GPL1261 |
|
Resting Macrophages M0 BMMF-2
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: none
replicate: 2
|
Replicate 2
|
| Sample_geo_accession | GSM868294
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868294/suppl/GSM868294.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
|
GSM868295 | GPL1261 |
|
Resting Macrophages M0 BMMF-3
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: none
replicate: 3
|
Replicate 3
|
| Sample_geo_accession | GSM868295
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868295/suppl/GSM868295.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
|
GSM868296 | GPL1261 |
|
IL-4 treated macrophages M2 BMMF-1
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: 18 hours with 20 ng/ml of mIL-4
replicate: 1
|
Replicate 1
|
| Sample_geo_accession | GSM868296
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868296/suppl/GSM868296.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
|
GSM868297 | GPL1261 |
|
IL-4 treated macrophages M2 BMMF-2
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: 18 hours with 20 ng/ml of mIL-4
replicate: 2
|
Replicate 2
|
| Sample_geo_accession | GSM868297
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868297/suppl/GSM868297.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
|
GSM868298 | GPL1261 |
|
IL-4 treated macrophages M2 BMMF-3
|
Bone Marrow derived macrophages
|
strain: C57BL/6J
cell type: macrophages
treatment: 18 hours with 20 ng/ml of mIL-4
replicate: 3
|
Replicate 3
|
| Sample_geo_accession | GSM868298
| | Sample_status | Public on Sep 29 2012
| | Sample_submission_date | Jan 30 2012
| | Sample_last_update_date | Sep 29 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells were treated for 18 hours with 20 ng/ml of mIL-4.
| | Sample_growth_protocol_ch1 | Mouse bone marrow derived macrophages were prepared by culturing bone marrow extracts for 7 days in RPMI 1640 supplemented with MCSF ( 15 % of L-cell conditioned medium).
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol
| | Sample_hyb_protocol | Affymetrix standard protocol
| | Sample_scan_protocol | Affymetrix standard protocol
| | Sample_data_processing | RMA in Affy R bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| | Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| | Sample_contact_laboratory | -
| | Sample_contact_department | Botnar Research Centre, Ndorms
| | Sample_contact_institute | Oxford University
| | Sample_contact_address | Windmill road
| | Sample_contact_city | Oxford
| | Sample_contact_state | Ox
| | Sample_contact_zip/postal_code | OX3 7LD
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868298/suppl/GSM868298.CEL.gz
| | Sample_series_id | GSE35435
| | Sample_series_id | GSE35495
| | Sample_data_row_count | 45101
| | |
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