Search results for the GEO ID: GSE35436 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM868299 | GPL1261 |
|
Thio permanox M0
|
thioglycolate-elicited murine peritoneal macrophages, incubated in OptiMEM-10 for 24 hrs on Permanox plastic
|
strain: C57BL/6J
replicate: 1
cell type: thioglycolate-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 for 24 hrs on Permanox plastic
|
Replicate 1
|
Sample_geo_accession | GSM868299
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868299/suppl/GSM868299.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
GSM868300 | GPL1261 |
|
Thio permanox M2
|
thioglycolate-elicited murine peritoneal macrophages, incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on Permanox plastic
|
strain: C57BL/6J
replicate: 2
cell type: thioglycolate-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on Permanox plastic
|
Replicate 2
|
Sample_geo_accession | GSM868300
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868300/suppl/GSM868300.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
GSM868301 | GPL1261 |
|
Thio TCP M0
|
thioglycolate-elicited murine peritoneal macrophages, incubated in OptiMEM-10 for 24 hrs on tissue culture plastic
|
strain: C57BL/6J
replicate: 3
cell type: thioglycolate-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 for 24 hrs on tissue culture plastic
|
Replicate 3
|
Sample_geo_accession | GSM868301
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868301/suppl/GSM868301.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
GSM868302 | GPL1261 |
|
Thio TCP M2
|
thioglycolate-elicited murine peritoneal macrophages, incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on tissue culture plastic
|
strain: C57BL/6J
replicate: 1
cell type: thioglycolate-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on tissue culture plastic
|
Replicate 1
|
Sample_geo_accession | GSM868302
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868302/suppl/GSM868302.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
GSM868303 | GPL1261 |
|
Biogel M0
|
biogel-elicited murine peritoneal macrophages, incubated in OptiMEM-10 for 24 hrs on tissue culture plastic
|
strain: C57BL/6J
replicate: 2
cell type: biogel-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 for 24 hrs on tissue culture plastic
|
Replicate 2
|
Sample_geo_accession | GSM868303
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868303/suppl/GSM868303.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
GSM868304 | GPL1261 |
|
Biogel M2
|
biogel-elicited murine peritoneal macrophages, incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on tissue culture plastic
|
strain: C57BL/6J
replicate: 3
cell type: biogel-elicited murine peritoneal macrophages
treatment: incubated in OptiMEM-10 + IL-4 (supernatant from IL-4 producing cell line) for 24 hrs on tissue culture plastic
|
Replicate 3
|
Sample_geo_accession | GSM868304
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Jan 30 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Cells were treated for 24 hours with IL-4 (supernatant of mIL-4 cDNA transfected X63Ag8-653 plasmcytoma cell line).
| Sample_growth_protocol_ch1 | Mouse thioglycollate and Biogel elicited macrophages were isolated by adhesion and cultured on Pemanox or Tissue culture plastic, in RPMI 1640 .
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix standard protocol
| Sample_hyb_protocol | Affymetrix standard protocol
| Sample_scan_protocol | Affymetrix standard protocol
| Sample_data_processing | RMA in Affy R bioconductor
| Sample_platform_id | GPL1261
| Sample_contact_name | Fernando,Oneissi,Martinez Estrada
| Sample_contact_email | fernando.martinezestrada@kennedy.ox.ac.uk
| Sample_contact_laboratory | -
| Sample_contact_department | Botnar Research Centre, Ndorms
| Sample_contact_institute | Oxford University
| Sample_contact_address | Windmill road
| Sample_contact_city | Oxford
| Sample_contact_state | Ox
| Sample_contact_zip/postal_code | OX3 7LD
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM868nnn/GSM868304/suppl/GSM868304.CEL.gz
| Sample_series_id | GSE35436
| Sample_series_id | GSE35495
| Sample_data_row_count | 45101
| |
|
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