Search results for the GEO ID: GSE35593  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM871367 | GPL1261 |
|
S22860_wt_d25_Rep1
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OvarianGranulosa cells_wild type
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strain background: mixed background from FVB and C57BL/6
genotype/variation: wild type
age: d25
tissue: ovarian granulosa cells
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| Sample_geo_accession | GSM871367
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871367/suppl/GSM871367_S22860_wt_d25.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
|
GSM871368 | GPL1261 |
|
S22861_wt_d25_Rep2
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OvarianGranulosa cells_wild type
|
strain background: mixed background from FVB and C57BL/6
genotype/variation: wild type
age: d25
tissue: ovarian granulosa cells
|
|
| Sample_geo_accession | GSM871368
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871368/suppl/GSM871368_S22861_wt_d25.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
|
GSM871369 | GPL1261 |
|
S22864_F_d25_Rep1
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OvarianGranulosa cells_Foxo1/3 dKO
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strain background: mixed background from FVB and C57BL/6
genotype/variation: Foxo1 f/-;Foxo3 f/-; Amhr2-cre (Foxo1/3 dKO)
age: d25
tissue: ovarian granulosa cells
|
|
| Sample_geo_accession | GSM871369
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871369/suppl/GSM871369_S22864_F_d25.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
|
GSM871370 | GPL1261 |
|
S22865_F_d25_Rep2
|
OvarianGranulosa cells_Foxo1/3 dKO
|
strain background: mixed background from FVB and C57BL/6
genotype/variation: Foxo1 f/-;Foxo3 f/-; Amhr2-cre (Foxo1/3 dKO)
age: d25
tissue: ovarian granulosa cells
|
|
| Sample_geo_accession | GSM871370
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871370/suppl/GSM871370_S_22865_F_d25.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
|
GSM871371 | GPL1261 |
|
S22862_F_2m_Rep1
|
OvarianGranulosa cells_Foxo1/3 dKO
|
strain background: mixed background from FVB and C57BL/6
genotype/variation: Foxo1 f/-;Foxo3 f/-; Amhr2-cre (Foxo1/3 dKO)
age: 2 month
tissue: ovarian granulosa cells
|
|
| Sample_geo_accession | GSM871371
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871371/suppl/GSM871371_S_22862_F_2m.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
|
GSM871372 | GPL1261 |
|
S22863_F_2m_Rep2
|
OvarianGranulosa cells_Foxo1/3 dKO
|
strain background: mixed background from FVB and C57BL/6
genotype/variation: Foxo1 f/-;Foxo3 f/-; Amhr2-cre (Foxo1/3 dKO)
age: 2 month
tissue: ovarian granulosa cells
|
|
| Sample_geo_accession | GSM871372
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Feb 07 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were treated in accordance with the NIH Guide for the Care and Use of Laboratory Animals, as approved by the Animal Care and Use Committee at Baylor College of Medicine.
| | Sample_growth_protocol_ch1 | Animals were housed under a 16-h light/8-h dark schedule in the Center for Comparative Medicine at Baylor College of Medicine and provided food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction by RNeasy Mini Kit (Qiagen, Valencia, CA)
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
| | Sample_hyb_protocol | cRNA were hybridized on GeneChip Mouse Genome 430 2.0 Array using Hybridization Oven 640. The GeneChip® Fluidics Station 450 automates the delivery, timing and temperature control of reagents for staining and washing of the probe arrays.
| | Sample_scan_protocol | GeneChips were scanned using GeneArray™ Scanner 3000 and quantified with Affymetrix GCOS 1.4.
| | Sample_data_processing | The data were analyzed using affy package from Bioconductor with RMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Zhilin,,Liu
| | Sample_contact_email | zhilinl@bcm.tmc.edu
| | Sample_contact_phone | 7137986259
| | Sample_contact_laboratory | Dr. JoAnne S. Richards
| | Sample_contact_department | Molecular and Cellular Biology
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM871nnn/GSM871372/suppl/GSM871372_S22863_F_2m.cel.gz
| | Sample_series_id | GSE35593
| | Sample_data_row_count | 45101
| | |
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