Search results for the GEO ID: GSE35751  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM874416 | GPL1261 |
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S100a10 cells, cortex, TRAP RNA, biological rep1
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S100a10 cells, cortex, TRAP RNA
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strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: TRAP
driver: S100a10
line: ES691
tissue: cortex
treatment: none
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S100a10_IP_1
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| Sample_geo_accession | GSM874416
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874416/suppl/GSM874416.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
|
GSM874417 | GPL1261 |
|
Whole cortex, input RNA, biological rep1
|
Whole cortex, input RNA
|
strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: input
driver: S100a10
line: ES691
tissue: cortex
treatment: none
|
Cortex_UB_1
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| Sample_geo_accession | GSM874417
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874417/suppl/GSM874417.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
|
GSM874418 | GPL1261 |
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S100a10 cells, cortex, TRAP RNA, biological rep2
|
S100a10 cells, cortex, TRAP RNA
|
strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: TRAP
driver: S100a10
line: ES691
tissue: cortex
treatment: none
|
S100a10_IP_2
|
| Sample_geo_accession | GSM874418
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874418/suppl/GSM874418.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
|
GSM874419 | GPL1261 |
|
Whole cortex, input RNA, biological rep2
|
Whole cortex, input RNA
|
strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: input
driver: S100a10
line: ES691
tissue: cortex
treatment: none
|
Cortex_UB_2
|
| Sample_geo_accession | GSM874419
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874419/suppl/GSM874419.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
|
GSM874420 | GPL1261 |
|
S100a10 cells, cortex, TRAP RNA, biological rep3
|
S100a10 cells, cortex, TRAP RNA
|
strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: TRAP
driver: S100a10
line: ES691
tissue: cortex
treatment: none
|
S100a10_IP_3
|
| Sample_geo_accession | GSM874420
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874420/suppl/GSM874420.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
|
GSM874421 | GPL1261 |
|
Whole cortex, input RNA, biological rep3
|
Whole cortex, input RNA
|
strain: backcrossed 3-5 generations on C57BL/6 from FVB
rna: input
driver: S100a10
line: ES691
tissue: cortex
treatment: none
|
Cortex_UB_3
|
| Sample_geo_accession | GSM874421
| | Sample_status | Public on May 25 2012
| | Sample_submission_date | Feb 13 2012
| | Sample_last_update_date | Jul 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | TRAP affinity purification of ribosomes from BAC transgenic mice (see accompanying manuscript), followed by Trizol-LS extraction, DNase treatment, and RNeasy Minelute Cleanup.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix two cycle amplification kit, starting with 15 ng of total RNA.
| | Sample_hyb_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_scan_protocol | Standard Affymetrix protocol for the mouse 430 2.0 platform.
| | Sample_data_processing | GCRMA normalization within biological replicate groups was performed in GeneSpring GX 7.3.1.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Eric,F,Schmidt
| | Sample_contact_laboratory | Heintz
| | Sample_contact_institute | The Rockefeller Univeristy
| | Sample_contact_address | 1230 York Avenue
| | Sample_contact_city | New York
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM874nnn/GSM874421/suppl/GSM874421.CEL.gz
| | Sample_series_id | GSE35751
| | Sample_series_id | GSE35766
| | Sample_data_row_count | 45101
| | |
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