Search results for the GEO ID: GSE3585  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM82381 | GPL96 |
|
T54 Non failing heart biopsy
|
heart, subendocardial left ventricle
|
Non failing
|
T54 Non failing heart biopsy
|
| Sample_geo_accession | GSM82381
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82381/suppl/GSM82381.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82381/suppl/GSM82381.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82382 | GPL96 |
|
T55 Non failing heart biopsy
|
heart, subendocardial left ventricle
|
Non failing
|
T55 Non failing heart biopsy
|
| Sample_geo_accession | GSM82382
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82382/suppl/GSM82382.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82382/suppl/GSM82382.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82383 | GPL96 |
|
T56 Non failing heart biopsy
|
heart, subendocardial left ventricle
|
Non failing
|
T56 Non failing heart biopsy
|
| Sample_geo_accession | GSM82383
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82383/suppl/GSM82383.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82383/suppl/GSM82383.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82384 | GPL96 |
|
T57 Non failing heart biopsy
|
heart, subendocardial left ventricle
|
Non failing
|
T57 Non failing heart biopsy
|
| Sample_geo_accession | GSM82384
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82384/suppl/GSM82384.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82384/suppl/GSM82384.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82385 | GPL96 |
|
T58 Non failing heart biopsy
|
heart, subendocardial left ventricle
|
Non failing
|
T58 Non failing heart biopsy
|
| Sample_geo_accession | GSM82385
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82385/suppl/GSM82385.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82385/suppl/GSM82385.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82386 | GPL96 |
|
T59 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T59 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82386
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82386/suppl/GSM82386.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82386/suppl/GSM82386.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82387 | GPL96 |
|
T60 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T60 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82387
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82387/suppl/GSM82387.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82387/suppl/GSM82387.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82388 | GPL96 |
|
T61 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T61 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82388
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82388/suppl/GSM82388.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82388/suppl/GSM82388.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82389 | GPL96 |
|
T62 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T62 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82389
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82389/suppl/GSM82389.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82389/suppl/GSM82389.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82390 | GPL96 |
|
T63 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T63 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82390
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82390/suppl/GSM82390.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82390/suppl/GSM82390.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
| | |
|
GSM82391 | GPL96 |
|
T64 dilated cardiomyopathy heart biopsy
|
heart, subendocardial left ventricle
|
Dilated cardiomyopathy
|
T64 Dilated cardiomyopathy heart biopsy
|
| Sample_geo_accession | GSM82391
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82391/suppl/GSM82391.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82391/suppl/GSM82391.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
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GSM82392 | GPL96 |
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T65 dilated cardiomyopathy heart biopsy
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heart, subendocardial left ventricle
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Dilated cardiomyopathy
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T65 Dilated cardiomyopathy heart biopsy
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| Sample_geo_accession | GSM82392
| | Sample_status | Public on Aug 01 2006
| | Sample_submission_date | Nov 08 2005
| | Sample_last_update_date | Jun 02 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Department of Medicine I, University Hospital Grosshadern, Ludwig-Maximilians-University, Munich, Germany
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | total RNA was extracted using Qiagen RNeasy reagents
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 10 µg of total RNA was processed to produce biotinylated cRNA targets
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Microarray raw data were normalized using robust multi-array average16 (RMA) implemented in Bioconductor's “affy”-package. Probe sets with “absent” calls (as defined by Bioconductor’s affy-package) in more than 50% of tissue samples in either group (NF and DCM) were excluded
| | Sample_platform_id | GPL96
| | Sample_contact_name | Ruprecht,,Kuner
| | Sample_contact_email | r.kuner@dkfz.de
| | Sample_contact_laboratory | Unit Cancer Genome Research
| | Sample_contact_department | Molecular Genetics
| | Sample_contact_institute | German Cancer Research Center and National Center of Tumor Diseases
| | Sample_contact_address | Im Neuenheimer Feld 460
| | Sample_contact_city | Heidelberg
| | Sample_contact_zip/postal_code | 69120
| | Sample_contact_country | Germany
| | Sample_contact_web_link | http://www.dkfz.de/en/genetics/TranslationalOncogenomics/cancer-genome-research.html/groups.asp?siteID=93
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82392/suppl/GSM82392.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM82nnn/GSM82392/suppl/GSM82392.EXP.gz
| | Sample_series_id | GSE3585
| | Sample_data_row_count | 10664
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