Search results for the GEO ID: GSE36018  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM879420 | GPL1261 |
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APCs_ P25 stimulated_O.N.
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B6 APCs, P25 stimulated
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strain: C57BL/6
gender: female
age: 10 weeks
tissue: spleen
treatment: P25
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| Sample_geo_accession | GSM879420
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Feb 23 2012
| | Sample_last_update_date | Mar 16 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA from APCs was purified with the RNeasy mini kit (QIAGEN) following the manufacturer’s instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were synthesized by GeneChip One-Cycle Target Labeling and Control Reagents (Affymetrix) from 1ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on the GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G.
| | Sample_data_processing | Single Array Analysis was calculated by Microarray Suite version 5.0 (MAS5.0) with Affymetrix default settings and global scaling as normalization method using GCOS (GeneChip Operating Software) Ver1.4. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ai,,Kariyone
| | Sample_contact_institute | University of Toyama
| | Sample_contact_address | 2630 Sugitani
| | Sample_contact_city | Toyama City
| | Sample_contact_zip/postal_code | 930-0194
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879420/suppl/GSM879420_EA0471_08.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879420/suppl/GSM879420_EA0471_08abs.CHP.gz
| | Sample_series_id | GSE36018
| | Sample_data_row_count | 45101
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GSM879421 | GPL1261 |
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APCs_ non-stimulated
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B6 APCs, non-stimulated
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strain: C57BL/6
gender: female
age: 10 weeks
tissue: spleen
treatment: none
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| Sample_geo_accession | GSM879421
| | Sample_status | Public on Mar 01 2012
| | Sample_submission_date | Feb 23 2012
| | Sample_last_update_date | Mar 16 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The total RNA from APCs was purified with the RNeasy mini kit (QIAGEN) following the manufacturer’s instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were synthesized by GeneChip One-Cycle Target Labeling and Control Reagents (Affymetrix) from 1ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on the GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G.
| | Sample_data_processing | Single Array Analysis was calculated by Microarray Suite version 5.0 (MAS5.0) with Affymetrix default settings and global scaling as normalization method using GCOS (GeneChip Operating Software) Ver1.4. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Ai,,Kariyone
| | Sample_contact_institute | University of Toyama
| | Sample_contact_address | 2630 Sugitani
| | Sample_contact_city | Toyama City
| | Sample_contact_zip/postal_code | 930-0194
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879421/suppl/GSM879421_EA0471_07.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM879nnn/GSM879421/suppl/GSM879421_EA0471_07abs.CHP.gz
| | Sample_series_id | GSE36018
| | Sample_data_row_count | 45101
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