Search results for the GEO ID: GSE36820  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM902385 | GPL570 |
|
Normal Sample 1
|
normal human salivary gland
|
tissue: non-neoplastic salivary gland
organ site at which tumor arose: submandibular salivary gland
donor sex: unknown
|
07-28_N1
Gene expression data from normal human salivary gland.
|
| Sample_geo_accession | GSM902385
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902385/suppl/GSM902385_07-28_N1.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902386 | GPL570 |
|
Normal Sample 2
|
normal human salivary gland
|
tissue: non-neoplastic salivary gland
organ site at which tumor arose: submandibular salivary gland
donor sex: unknown
|
07-28_N2
Gene expression data from normal human salivary gland.
|
| Sample_geo_accession | GSM902386
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902386/suppl/GSM902386_07-28_N2.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902387 | GPL570 |
|
Normal Sample 3
|
normal human salivary gland
|
tissue: non-neoplastic salivary gland
organ site at which tumor arose: submandibular salivary gland
donor sex: unknown
|
07-28_N4
Gene expression data from normal human salivary gland.
|
| Sample_geo_accession | GSM902387
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902387/suppl/GSM902387_07-28_N4.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902388 | GPL570 |
|
ACC Xenograft X1
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: nasal cavity
donor sex: male
|
08-34_ACCX1
Gene expression data from human adenoid cystic carcinoma xenograft
|
| Sample_geo_accession | GSM902388
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902388/suppl/GSM902388_08-34_ACCX1.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902389 | GPL570 |
|
ACC Xenograft X11
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: maxilla
donor sex: female
|
08-34_ACCX11
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902389
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902389/suppl/GSM902389_08-34_ACCX11.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902390 | GPL570 |
|
ACC Xenograft X12
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: trachea
donor sex: female
|
08-34_ACCX12
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902390
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902390/suppl/GSM902390_08-34_ACCX12.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902391 | GPL570 |
|
ACC Xenograft X16
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: lung bronchus
donor sex: female
|
08-34_ACCX16
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902391
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902391/suppl/GSM902391_08-34_ACCX16.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902392 | GPL570 |
|
ACC Xenograft X2
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: parotid salivary gland
donor sex: male
|
08-34_ACCX2
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902392
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902392/suppl/GSM902392_08-34_ACCX2.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902393 | GPL570 |
|
ACC Xenograft X4
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: oral cavity
donor sex: male
|
08-34_ACCX4
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902393
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902393/suppl/GSM902393_08-34_ACCX4.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902394 | GPL570 |
|
ACC Xenograft X5
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: oral cavity
donor sex: male
|
08-34_ACCX5
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902394
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902394/suppl/GSM902394_08-34_ACCX5.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902395 | GPL570 |
|
ACC Xenograft X5M1
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: metastasis to lung
organ site at which tumor arose: oral cavity
donor sex: male
|
08-34_ACCX5M1
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902395
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902395/suppl/GSM902395_08-34_ACCX5M1.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902396 | GPL570 |
|
ACC Xenograft X6
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: metastasis to lung
organ site at which tumor arose: parotid salivary gland
donor sex: male
|
08-34_ACCX6
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902396
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902396/suppl/GSM902396_08-34_ACCX6.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902397 | GPL570 |
|
ACC Xenograft X9
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: parotid salivary gland
donor sex: female
|
08-34_ACCX9
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902397
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902397/suppl/GSM902397_08-34_ACCX9.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
|
GSM902398 | GPL570 |
|
ACC Xenograft MAD04-385
|
human adenoid cystic carcinoma grown as xenograft in mouse host
|
tissue: adenoid cystic carcinoma grown as xenograft tumor
original tumor status: primary
organ site at which tumor arose: oral cavity
donor sex: female
|
08-34_MAD04-385
Gene expression data from human adenoid cystic carcinoma xenograft.
|
| Sample_geo_accession | GSM902398
| | Sample_status | Public on Mar 27 2012
| | Sample_submission_date | Mar 26 2012
| | Sample_last_update_date | Mar 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | None.
| | Sample_growth_protocol_ch1 | Xenograft tumors were grown subcutaneously in nude mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Isolation of total RNA was performed using RNeasy spin columns according to the manufacturer's protocol (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix p/n 900493 GeneChip® Expression 3' Amplification One-Cycle Target Labeling and Control Reagents.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Human Genome Arrays. GeneChips were washed and stained in the Affymetrix Fluidics Station 450 using the EukGE-WS2v5 fluidics protocol.
| | Sample_scan_protocol | Affymetrix scanner 3000 using manufacturer settings.
| | Sample_data_processing | The images generated in the scanning were acquired to make the .DAT files, which in turn were converted to probe-intensity coordinated .CEL files, using the GCOS software package (Affymetrix).
| | Sample_platform_id | GPL570
| | Sample_contact_name | Sudhir,R,Chowbina
| | Sample_contact_department | Advanced Biomedical Computing Center
| | Sample_contact_institute | SAIC-Frederick
| | Sample_contact_address | Frederick
| | Sample_contact_city | Frederick
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 21703
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM902nnn/GSM902398/suppl/GSM902398_08-34_MAD04-385.CEL.gz
| | Sample_series_id | GSE36820
| | Sample_data_row_count | 54675
| | |
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