Search results for the GEO ID: GSE37566  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM921669 | GPL1261 |
|
CDP_1
|
bone marrow CDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Common Dendritic cell Progenitors (CDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117lo
|
CDP_1.CEL
|
| Sample_geo_accession | GSM921669
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921669/suppl/GSM921669_CDP_1.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921670 | GPL1261 |
|
CDP_2
|
bone marrow CDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Common Dendritic cell Progenitors (CDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117lo
|
CDP_2.CEL
|
| Sample_geo_accession | GSM921670
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921670/suppl/GSM921670_CDP_2.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921671 | GPL1261 |
|
CDP_3
|
bone marrow CDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Common Dendritic cell Progenitors (CDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117lo
|
CDP_3.CEL
|
| Sample_geo_accession | GSM921671
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921671/suppl/GSM921671_CDP_3.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921672 | GPL1261 |
|
MDP_1
|
bone marrow MDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Macrophage & Dendritic cell Progenitors (MDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117hi
|
MDP_1.CEL
|
| Sample_geo_accession | GSM921672
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921672/suppl/GSM921672_MDP_1.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921673 | GPL1261 |
|
MDP_2
|
bone marrow MDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Macrophage & Dendritic cell Progenitors (MDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117hi
|
MDP_2.CEL
|
| Sample_geo_accession | GSM921673
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921673/suppl/GSM921673_MDP_2.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921674 | GPL1261 |
|
MDP_3
|
bone marrow MDP
|
strain: C57BL/6
gender: female
age: 6-8weeks
tissue source: bone marrow
cell type: Macrophage & Dendritic cell Progenitors (MDPs)
phenotype: CD19-CD3-NK1.1-B220-CD11c-CD11b-Sca1-CD135+CD115+CD117hi
|
MDP_3.CEL
|
| Sample_geo_accession | GSM921674
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921674/suppl/GSM921674_MDP_3.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921675 | GPL1261 |
|
mono_1
|
bone marrow mono
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: Ly6Chi monocytes
phenotype: CD19-CD3-NK1.1-B220-CD11b+CD115+Ly6C+Ly6G-
|
mono_1.CEL
|
| Sample_geo_accession | GSM921675
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | naive, wildtype mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921675/suppl/GSM921675_mono_1.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921676 | GPL1261 |
|
mono_2
|
bone marrow mono
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: Ly6Chi monocytes
phenotype: CD19-CD3-NK1.1-B220-CD11b+CD115+Ly6C+Ly6G-
|
mono_2.CEL
|
| Sample_geo_accession | GSM921676
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | naive, wildtype mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921676/suppl/GSM921676_mono_2.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921677 | GPL1261 |
|
mono_3
|
bone marrow mono
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: Ly6Chi monocytes
phenotype: CD19-CD3-NK1.1-B220-CD11b+CD115+Ly6C+Ly6G-
|
mono_3.CEL
|
| Sample_geo_accession | GSM921677
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | naive, wildtype mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921677/suppl/GSM921677_mono_3.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921678 | GPL1261 |
|
preDC_1
|
bone marrow preDC
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: committed dendritic cell precursors (pre-DCs)
phenotype: CD19-CD3-NK1.1-B220-CD11c+MHCII-CD135+Sirpa-
|
preDC_1.CEL
|
| Sample_geo_accession | GSM921678
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921678/suppl/GSM921678_preDC_1.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921679 | GPL1261 |
|
preDC_2
|
bone marrow preDC
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: committed dendritic cell precursors (pre-DCs)
phenotype: CD19-CD3-NK1.1-B220-CD11c+MHCII-CD135+Sirpa-
|
preDC_2.CEL
|
| Sample_geo_accession | GSM921679
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921679/suppl/GSM921679_preDC_2.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
| | |
|
GSM921680 | GPL1261 |
|
preDC_3
|
bone marrow preDC
|
strain: C57BL/6
gender: male
age: 6-8weeks
tissue source: bone marrow
cell type: committed dendritic cell precursors (pre-DCs)
phenotype: CD19-CD3-NK1.1-B220-CD11c+MHCII-CD135+Sirpa-
|
preDC_3.CEL
|
| Sample_geo_accession | GSM921680
| | Sample_status | Public on Apr 26 2012
| | Sample_submission_date | Apr 25 2012
| | Sample_last_update_date | Apr 26 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Mice were treated with Flt3L in vivo to expand DCs and DC progenitors
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Mini prep extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip MOE-430 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner.
| | Sample_data_processing | The data were analyzed with Genespring (v.10), using default RMA normalization. The normalized values are log2 scaled, where the median is set as zero.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Matthew,M,Meredith
| | Sample_contact_email | mmeredith@rockefeller.edu
| | Sample_contact_institute | The Rockefeller University
| | Sample_contact_address | 1230 York Ave
| | Sample_contact_city | New York
| | Sample_contact_state | New York
| | Sample_contact_zip/postal_code | 10065
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM921nnn/GSM921680/suppl/GSM921680_preDC_3.CEL.gz
| | Sample_series_id | GSE37566
| | Sample_data_row_count | 45101
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