Search results for the GEO ID: GSE37580 |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM922636 | GPL570 |
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HL60 untreated
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HL60 cells, untreated
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cell line: HL60
cell type: hematopoietic stem
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Sample_geo_accession | GSM922636
| Sample_status | Public on Jun 25 2012
| Sample_submission_date | Apr 25 2012
| Sample_last_update_date | Jun 25 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | HL60 cells were untreated, or treated with 3ug/ml of Eltrombopag for 36 hrs in RPMI with 10% FBS
| Sample_growth_protocol_ch1 | Cells were cultured in RPMI + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from ~5 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix)
| Sample_hyb_protocol | Following fragmentation, ~5 microg of cRNA were hybridized for 16 hr at 45C on Human Genome 133 plus2 Array. GeneChips were washed and stained in an Affymetrix Fluidics Station
| Sample_scan_protocol | Standard Affymetrix Scanner protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings; CEL files were generated. CEL files processed/normalized using DNA-Chip Analyzer (dChip) to generate probeset-level signal intensity data. dChip-processed signal intensity dChip-processed signal intensity dChip-processed signal intensity
| Sample_platform_id | GPL570
| Sample_contact_name | Boris,,Bartholdy
| Sample_contact_email | bbarthol@einstein.yu.edu
| Sample_contact_laboratory | Steidl lab
| Sample_contact_department | Cell Biology
| Sample_contact_institute | Albert Einstein College of Medicine
| Sample_contact_address | 1300 Morris Park Ave
| Sample_contact_city | Bronx
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10461
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM922nnn/GSM922636/suppl/GSM922636_070209_HGU133_PLUS_2.0_CM_009-0015.CEL.gz
| Sample_series_id | GSE37580
| Sample_data_row_count | 54613
| |
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GSM922637 | GPL570 |
|
HL60 EP 3ug/ml
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HL60 cells, 3ug/ml Eltrombopag (EP)
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cell line: HL60
cell type: hematopoietic stem
|
|
Sample_geo_accession | GSM922637
| Sample_status | Public on Jun 25 2012
| Sample_submission_date | Apr 25 2012
| Sample_last_update_date | Jun 25 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | HL60 cells were untreated, or treated with 3ug/ml of Eltrombopag for 36 hrs in RPMI with 10% FBS
| Sample_growth_protocol_ch1 | Cells were cultured in RPMI + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from ~5 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix)
| Sample_hyb_protocol | Following fragmentation, ~5 microg of cRNA were hybridized for 16 hr at 45C on Human Genome 133 plus2 Array. GeneChips were washed and stained in an Affymetrix Fluidics Station
| Sample_scan_protocol | Standard Affymetrix Scanner protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings; CEL files were generated. CEL files processed/normalized using DNA-Chip Analyzer (dChip) to generate probeset-level signal intensity data. dChip-processed signal intensity dChip-processed signal intensity dChip-processed signal intensity
| Sample_platform_id | GPL570
| Sample_contact_name | Boris,,Bartholdy
| Sample_contact_email | bbarthol@einstein.yu.edu
| Sample_contact_laboratory | Steidl lab
| Sample_contact_department | Cell Biology
| Sample_contact_institute | Albert Einstein College of Medicine
| Sample_contact_address | 1300 Morris Park Ave
| Sample_contact_city | Bronx
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 10461
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM922nnn/GSM922637/suppl/GSM922637_070209_HGU133_PLUS_2.0_CM_009-0016.CEL.gz
| Sample_series_id | GSE37580
| Sample_data_row_count | 54613
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