Search results for the GEO ID: GSE37658  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM925107 | GPL1261 |
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Control at d3.5, replicate 1
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Mouse ES cell line ER71 A17C, differentiated by EB formation for 3.5 days.
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cell line: ES cell line ER71 A17C with a doxycycline inducible expression casette of Etv2 (ER71 A2Lox.cre)
age: Day 3.5 of differentiation
genotype/variation: control
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Gene expression data of Flk1 positive cells in Ebs differentiated for 3.5 days in a mesoderm inducing condition
KB_D31off
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| Sample_geo_accession | GSM925107
| | Sample_status | Public on Jul 04 2012
| | Sample_submission_date | Apr 30 2012
| | Sample_last_update_date | Jul 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | 0.5 microg/ml doxycycline from day 3.0 to day 3.5
| | Sample_growth_protocol_ch1 | See Iacovino et al. Stem Cells Dev. 2009;18:783-792., and Dang et al Biotechnol Bioeng. 2002;78:442-453.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol followed by extraction by 1-butanol and diethyl ether.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | MessageAmpII-Biotin Enhanced Kit
| | Sample_hyb_protocol | Amplified aRNAs were hybridized to Affymetrix mouse 430 2.0 full genome array chips at the BioMedical Genomics Center of the University of Minnesota BioMedical Genomics Center of the University of Minnesota
| | Sample_scan_protocol | GeneChip were scanned according to Affymetrix standard protocols
| | Sample_data_processing | The data were processed with Affymetrix RMA method using R/Bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fengli,,Fu
| | Sample_contact_email | fuxxx026@umn.edu
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | 312 Church Street SE
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM925nnn/GSM925107/suppl/GSM925107_KB_1off.CEL.gz
| | Sample_series_id | GSE37658
| | Sample_data_row_count | 45101
| | |
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GSM925108 | GPL1261 |
|
Dox induction at d3.5, replicate 1
|
Mouse ES cell line ER71 A17C, differentiated by EB formation for 3.5 days (Etv2 overexpressed from day 3.0 to day 3.5).
|
cell line: ES cell line ER71 A17C with a doxycycline inducible expression casette of Etv2 (ER71 A2Lox.cre)
age: Day 3.5 of differentiation
genotype/variation: Etv2 overexpression
|
Gene expression data of Flk1 positive cells in Ebs differentiated for 3.5 days in a mesoderm inducing condition. Etv2 was induced to overexpress from day 3.0 to 3.5 (0.5 microg/ml doxycycline).
KB_D31on
|
| Sample_geo_accession | GSM925108
| | Sample_status | Public on Jul 04 2012
| | Sample_submission_date | Apr 30 2012
| | Sample_last_update_date | Jul 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | 0.5 microg/ml doxycycline from day 3.0 to day 3.5
| | Sample_growth_protocol_ch1 | See Iacovino et al. Stem Cells Dev. 2009;18:783-792., and Dang et al Biotechnol Bioeng. 2002;78:442-453.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol followed by extraction by 1-butanol and diethyl ether.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | MessageAmpII-Biotin Enhanced Kit
| | Sample_hyb_protocol | Amplified aRNAs were hybridized to Affymetrix mouse 430 2.0 full genome array chips at the BioMedical Genomics Center of the University of Minnesota BioMedical Genomics Center of the University of Minnesota
| | Sample_scan_protocol | GeneChip were scanned according to Affymetrix standard protocols
| | Sample_data_processing | The data were processed with Affymetrix RMA method using R/Bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fengli,,Fu
| | Sample_contact_email | fuxxx026@umn.edu
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | 312 Church Street SE
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM925nnn/GSM925108/suppl/GSM925108_KB_1on.CEL.gz
| | Sample_series_id | GSE37658
| | Sample_data_row_count | 45101
| | |
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GSM925109 | GPL1261 |
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Control at d3.5, replicate 2
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Mouse ES cell line ER71 A17C, differentiated by EB formation for 3.5 days.
|
cell line: ES cell line ER71 A17C with a doxycycline inducible expression casette of Etv2 (ER71 A2Lox.cre)
age: Day 3.5 of differentiation
genotype/variation: control
|
Gene expression data of Flk1 positive cells in Ebs differentiated for 3.5 days in a mesoderm inducing condition
KB_D32off
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| Sample_geo_accession | GSM925109
| | Sample_status | Public on Jul 04 2012
| | Sample_submission_date | Apr 30 2012
| | Sample_last_update_date | Jul 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | 0.5 microg/ml doxycycline from day 3.0 to day 3.5
| | Sample_growth_protocol_ch1 | See Iacovino et al. Stem Cells Dev. 2009;18:783-792., and Dang et al Biotechnol Bioeng. 2002;78:442-453.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol followed by extraction by 1-butanol and diethyl ether.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | MessageAmpII-Biotin Enhanced Kit
| | Sample_hyb_protocol | Amplified aRNAs were hybridized to Affymetrix mouse 430 2.0 full genome array chips at the BioMedical Genomics Center of the University of Minnesota BioMedical Genomics Center of the University of Minnesota
| | Sample_scan_protocol | GeneChip were scanned according to Affymetrix standard protocols
| | Sample_data_processing | The data were processed with Affymetrix RMA method using R/Bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fengli,,Fu
| | Sample_contact_email | fuxxx026@umn.edu
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | 312 Church Street SE
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM925nnn/GSM925109/suppl/GSM925109_KB_2off.CEL.gz
| | Sample_series_id | GSE37658
| | Sample_data_row_count | 45101
| | |
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GSM925111 | GPL1261 |
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Control at d3.5, replicate 3
|
Mouse ES cell line ER71 A17C, differentiated by EB formation for 3.5 days.
|
cell line: ES cell line ER71 A17C with a doxycycline inducible expression casette of Etv2 (ER71 A2Lox.cre)
age: Day 3.5 of differentiation
genotype/variation: control
|
Gene expression data of Flk1 positive cells in Ebs differentiated for 3.5 days in a mesoderm inducing condition
KB_D33off
|
| Sample_geo_accession | GSM925111
| | Sample_status | Public on Jul 04 2012
| | Sample_submission_date | Apr 30 2012
| | Sample_last_update_date | Jul 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | 0.5 microg/ml doxycycline from day 3.0 to day 3.5
| | Sample_growth_protocol_ch1 | See Iacovino et al. Stem Cells Dev. 2009;18:783-792., and Dang et al Biotechnol Bioeng. 2002;78:442-453.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol followed by extraction by 1-butanol and diethyl ether.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | MessageAmpII-Biotin Enhanced Kit
| | Sample_hyb_protocol | Amplified aRNAs were hybridized to Affymetrix mouse 430 2.0 full genome array chips at the BioMedical Genomics Center of the University of Minnesota BioMedical Genomics Center of the University of Minnesota
| | Sample_scan_protocol | GeneChip were scanned according to Affymetrix standard protocols
| | Sample_data_processing | The data were processed with Affymetrix RMA method using R/Bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fengli,,Fu
| | Sample_contact_email | fuxxx026@umn.edu
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | 312 Church Street SE
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM925nnn/GSM925111/suppl/GSM925111_KB_3off.CEL.gz
| | Sample_series_id | GSE37658
| | Sample_data_row_count | 45101
| | |
|
GSM925112 | GPL1261 |
|
Dox induction at d3.5, replicate 3
|
Mouse ES cell line ER71 A17C, differentiated by EB formation for 3.5 days (Etv2 overexpressed from day 3.0 to day 3.5).
|
cell line: ES cell line ER71 A17C with a doxycycline inducible expression casette of Etv2 (ER71 A2Lox.cre)
age: Day 3.5 of differentiation
genotype/variation: Etv2 overexpression
|
Gene expression data of Flk1 positive cells in Ebs differentiated for 3.5 days in a mesoderm inducing condition. Etv2 was induced to overexpress from day 3.0 to 3.5 (0.5 microg/ml doxycycline).
KB_D33on
|
| Sample_geo_accession | GSM925112
| | Sample_status | Public on Jul 04 2012
| | Sample_submission_date | Apr 30 2012
| | Sample_last_update_date | Jul 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | 0.5 microg/ml doxycycline from day 3.0 to day 3.5
| | Sample_growth_protocol_ch1 | See Iacovino et al. Stem Cells Dev. 2009;18:783-792., and Dang et al Biotechnol Bioeng. 2002;78:442-453.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol followed by extraction by 1-butanol and diethyl ether.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | MessageAmpII-Biotin Enhanced Kit
| | Sample_hyb_protocol | Amplified aRNAs were hybridized to Affymetrix mouse 430 2.0 full genome array chips at the BioMedical Genomics Center of the University of Minnesota BioMedical Genomics Center of the University of Minnesota
| | Sample_scan_protocol | GeneChip were scanned according to Affymetrix standard protocols
| | Sample_data_processing | The data were processed with Affymetrix RMA method using R/Bioconductor
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Fengli,,Fu
| | Sample_contact_email | fuxxx026@umn.edu
| | Sample_contact_institute | University of Minnesota
| | Sample_contact_address | 312 Church Street SE
| | Sample_contact_city | Minneapolis
| | Sample_contact_state | MN
| | Sample_contact_zip/postal_code | 55455
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM925nnn/GSM925112/suppl/GSM925112_KB_3on.CEL.gz
| | Sample_series_id | GSE37658
| | Sample_data_row_count | 45101
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