Search results for the GEO ID: GSE38681  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM947519 | GPL1261 |
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WT LMPPs1
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wildtype murine LMPPs
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cell type: Lymphoid Primed Multipotent Progenitors (LMPPs)
strain: C57Bl/6
genotype: wildtype
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| Sample_geo_accession | GSM947519
| | Sample_status | Public on Jun 14 2012
| | Sample_submission_date | Jun 13 2012
| | Sample_last_update_date | Jun 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | WT versus knock-out LMPPs purified from 6-8 week old mice; KO allele described in Pub Med ID: 21387538
| | Sample_growth_protocol_ch1 | No growth- purification of native LMPPs from bone marrow of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | LMPPs were extracted from bone marrow and purified using flow cytometry for KSL (lack of lineage marker expression (Lin-) and postive expression for c-Kit and Sca-1) and high expression of Flt3. The RNA was extracted using RNAaqueous from Ambion.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion Message Amp kit to amplify and label mRNA
| | Sample_hyb_protocol | Affymetrix hybridization protocol
| | Sample_scan_protocol | Gene Chip Scanner 3000
| | Sample_data_processing | Array Star RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Margaret,A,Goodell
| | Sample_contact_email | goodell@bcm.tmc.edu
| | Sample_contact_phone | 713-798-1265
| | Sample_contact_department | Center for Cell and Gene Therapy
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, N1030
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM947nnn/GSM947519/suppl/GSM947519_WTLMPP1.cel.gz
| | Sample_series_id | GSE38681
| | Sample_data_row_count | 45037
| | |
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GSM947520 | GPL1261 |
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WT LMPPs2
|
wildtype murine LMPPs
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cell type: Lymphoid Primed Multipotent Progenitors (LMPPs)
strain: C57Bl/6
genotype: wildtype
|
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| Sample_geo_accession | GSM947520
| | Sample_status | Public on Jun 14 2012
| | Sample_submission_date | Jun 13 2012
| | Sample_last_update_date | Jun 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | WT versus knock-out LMPPs purified from 6-8 week old mice; KO allele described in Pub Med ID: 21387538
| | Sample_growth_protocol_ch1 | No growth- purification of native LMPPs from bone marrow of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | LMPPs were extracted from bone marrow and purified using flow cytometry for KSL (lack of lineage marker expression (Lin-) and postive expression for c-Kit and Sca-1) and high expression of Flt3. The RNA was extracted using RNAaqueous from Ambion.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion Message Amp kit to amplify and label mRNA
| | Sample_hyb_protocol | Affymetrix hybridization protocol
| | Sample_scan_protocol | Gene Chip Scanner 3000
| | Sample_data_processing | Array Star RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Margaret,A,Goodell
| | Sample_contact_email | goodell@bcm.tmc.edu
| | Sample_contact_phone | 713-798-1265
| | Sample_contact_department | Center for Cell and Gene Therapy
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, N1030
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM947nnn/GSM947520/suppl/GSM947520_WTLMPP2.cel.gz
| | Sample_series_id | GSE38681
| | Sample_data_row_count | 45037
| | |
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GSM947521 | GPL1261 |
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Lyl1 KO LMPPs1
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Lyl1-null murine LMPPs
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cell type: Lymphoid Primed Multipotent Progenitors (LMPPs)
strain: C57Bl/6
genotype: Lyl1-null
|
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| Sample_geo_accession | GSM947521
| | Sample_status | Public on Jun 14 2012
| | Sample_submission_date | Jun 13 2012
| | Sample_last_update_date | Jun 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | WT versus knock-out LMPPs purified from 6-8 week old mice; KO allele described in Pub Med ID: 21387538
| | Sample_growth_protocol_ch1 | No growth- purification of native LMPPs from bone marrow of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | LMPPs were extracted from bone marrow and purified using flow cytometry for KSL (lack of lineage marker expression (Lin-) and postive expression for c-Kit and Sca-1) and high expression of Flt3. The RNA was extracted using RNAaqueous from Ambion.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion Message Amp kit to amplify and label mRNA
| | Sample_hyb_protocol | Affymetrix hybridization protocol
| | Sample_scan_protocol | Gene Chip Scanner 3000
| | Sample_data_processing | Array Star RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Margaret,A,Goodell
| | Sample_contact_email | goodell@bcm.tmc.edu
| | Sample_contact_phone | 713-798-1265
| | Sample_contact_department | Center for Cell and Gene Therapy
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, N1030
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM947nnn/GSM947521/suppl/GSM947521_Lyl1KOLMPP1.cel.gz
| | Sample_series_id | GSE38681
| | Sample_data_row_count | 45037
| | |
|
GSM947522 | GPL1261 |
|
Lyl1 KO LMPPs2
|
Lyl1-null murine LMPPs
|
cell type: Lymphoid Primed Multipotent Progenitors (LMPPs)
strain: C57Bl/6
genotype: Lyl1-null
|
|
| Sample_geo_accession | GSM947522
| | Sample_status | Public on Jun 14 2012
| | Sample_submission_date | Jun 13 2012
| | Sample_last_update_date | Jun 14 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | WT versus knock-out LMPPs purified from 6-8 week old mice; KO allele described in Pub Med ID: 21387538
| | Sample_growth_protocol_ch1 | No growth- purification of native LMPPs from bone marrow of mice
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | LMPPs were extracted from bone marrow and purified using flow cytometry for KSL (lack of lineage marker expression (Lin-) and postive expression for c-Kit and Sca-1) and high expression of Flt3. The RNA was extracted using RNAaqueous from Ambion.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion Message Amp kit to amplify and label mRNA
| | Sample_hyb_protocol | Affymetrix hybridization protocol
| | Sample_scan_protocol | Gene Chip Scanner 3000
| | Sample_data_processing | Array Star RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Margaret,A,Goodell
| | Sample_contact_email | goodell@bcm.tmc.edu
| | Sample_contact_phone | 713-798-1265
| | Sample_contact_department | Center for Cell and Gene Therapy
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, N1030
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM947nnn/GSM947522/suppl/GSM947522_Lyl1KOLMPP2.cel.gz
| | Sample_series_id | GSE38681
| | Sample_data_row_count | 45037
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