Search results for the GEO ID: GSE39763  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM978845 | GPL570 |
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CB-EPC_rep1
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Outgrown EPC, Cord Blood
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tissue type: Cord blood
cell type: Endothelial progenitor cells
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The outgrowth EPC population after 2-4 week culture, enriched from cord blood
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| Sample_geo_accession | GSM978845
| | Sample_status | Public on Sep 21 2012
| | Sample_submission_date | Jul 31 2012
| | Sample_last_update_date | Sep 21 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No pre-treatment
| | Sample_growth_protocol_ch1 | Mononuclear cells (MNCs) were Histopaque-1077 isolated and plated in endothelial growth medium-2 on fibronectin-coated six-well plates at 37°C. After 3 days of culturing, the medium and nonadherent cells were removed. Thereafter, the medium were replaced every 2 days, and a certain number of LEPCs colonies formed, which emerge 2–4 weeks after the start of MNC culture.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by Qiagen miRNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | cRNA were hybridized, washed and stained on U133 plus 2.0 chips according to standard Affymetrix protocol.
| | Sample_scan_protocol | Chips are stained on Affymetrix GCS3000 scanner (scanner type M10)
| | Sample_data_processing | The CEL file was loaded to R/Bioconductor software and normalized by GC-RMA with default settings.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Tse-Shun,,Huang
| | Sample_contact_laboratory | Informatics Biology Lab
| | Sample_contact_department | Institute of Microbiology and Immunology
| | Sample_contact_institute | National Yang-Ming University
| | Sample_contact_address | No.155, Sec.2, Linong Street
| | Sample_contact_city | Taipei City
| | Sample_contact_zip/postal_code | 112
| | Sample_contact_country | Taiwan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM978nnn/GSM978845/suppl/GSM978845_CB-EPC-1.CEL.gz
| | Sample_series_id | GSE39763
| | Sample_data_row_count | 54675
| | |
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GSM978846 | GPL570 |
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CB-EPC_rep2
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Outgrown EPC, Cord Blood
|
tissue type: Cord blood
cell type: Endothelial progenitor cells
|
The outgrowth EPC population after 2-4 week culture, enriched from cord blood
|
| Sample_geo_accession | GSM978846
| | Sample_status | Public on Sep 21 2012
| | Sample_submission_date | Jul 31 2012
| | Sample_last_update_date | Sep 21 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No pre-treatment
| | Sample_growth_protocol_ch1 | Mononuclear cells (MNCs) were Histopaque-1077 isolated and plated in endothelial growth medium-2 on fibronectin-coated six-well plates at 37°C. After 3 days of culturing, the medium and nonadherent cells were removed. Thereafter, the medium were replaced every 2 days, and a certain number of LEPCs colonies formed, which emerge 2–4 weeks after the start of MNC culture.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by Qiagen miRNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | cRNA were hybridized, washed and stained on U133 plus 2.0 chips according to standard Affymetrix protocol.
| | Sample_scan_protocol | Chips are stained on Affymetrix GCS3000 scanner (scanner type M10)
| | Sample_data_processing | The CEL file was loaded to R/Bioconductor software and normalized by GC-RMA with default settings.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Tse-Shun,,Huang
| | Sample_contact_laboratory | Informatics Biology Lab
| | Sample_contact_department | Institute of Microbiology and Immunology
| | Sample_contact_institute | National Yang-Ming University
| | Sample_contact_address | No.155, Sec.2, Linong Street
| | Sample_contact_city | Taipei City
| | Sample_contact_zip/postal_code | 112
| | Sample_contact_country | Taiwan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM978nnn/GSM978846/suppl/GSM978846_CB-EPC-2.CEL.gz
| | Sample_series_id | GSE39763
| | Sample_data_row_count | 54675
| | |
|
GSM978847 | GPL570 |
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PB-EPC_rep1
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Outgrown EPC, peripheral blood
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tissue type: Peripheral blood
cell type: Endothelial progenitor cells
|
The outgrowth EPC population after 2-4 week culture, enriched from peripheral blood
|
| Sample_geo_accession | GSM978847
| | Sample_status | Public on Sep 21 2012
| | Sample_submission_date | Jul 31 2012
| | Sample_last_update_date | Sep 21 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No pre-treatment
| | Sample_growth_protocol_ch1 | Mononuclear cells (MNCs) were Histopaque-1077 isolated and plated in endothelial growth medium-2 on fibronectin-coated six-well plates at 37°C. After 3 days of culturing, the medium and nonadherent cells were removed. Thereafter, the medium were replaced every 2 days, and a certain number of LEPCs colonies formed, which emerge 2–4 weeks after the start of MNC culture.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by Qiagen miRNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | cRNA were hybridized, washed and stained on U133 plus 2.0 chips according to standard Affymetrix protocol.
| | Sample_scan_protocol | Chips are stained on Affymetrix GCS3000 scanner (scanner type M10)
| | Sample_data_processing | The CEL file was loaded to R/Bioconductor software and normalized by GC-RMA with default settings.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Tse-Shun,,Huang
| | Sample_contact_laboratory | Informatics Biology Lab
| | Sample_contact_department | Institute of Microbiology and Immunology
| | Sample_contact_institute | National Yang-Ming University
| | Sample_contact_address | No.155, Sec.2, Linong Street
| | Sample_contact_city | Taipei City
| | Sample_contact_zip/postal_code | 112
| | Sample_contact_country | Taiwan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM978nnn/GSM978847/suppl/GSM978847_PB-EPC-1.CEL.gz
| | Sample_series_id | GSE39763
| | Sample_data_row_count | 54675
| | |
|
GSM978848 | GPL570 |
|
PB-EPC_rep2
|
Outgrown EPC, peripheral blood
|
tissue type: Peripheral blood
cell type: Endothelial progenitor cells
|
The outgrowth EPC population after 2-4 week culture, enriched from peripheral blood
|
| Sample_geo_accession | GSM978848
| | Sample_status | Public on Sep 21 2012
| | Sample_submission_date | Jul 31 2012
| | Sample_last_update_date | Sep 21 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No pre-treatment
| | Sample_growth_protocol_ch1 | Mononuclear cells (MNCs) were Histopaque-1077 isolated and plated in endothelial growth medium-2 on fibronectin-coated six-well plates at 37°C. After 3 days of culturing, the medium and nonadherent cells were removed. Thereafter, the medium were replaced every 2 days, and a certain number of LEPCs colonies formed, which emerge 2–4 weeks after the start of MNC culture.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by Qiagen miRNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
| | Sample_hyb_protocol | cRNA were hybridized, washed and stained on U133 plus 2.0 chips according to standard Affymetrix protocol.
| | Sample_scan_protocol | Chips are stained on Affymetrix GCS3000 scanner (scanner type M10)
| | Sample_data_processing | The CEL file was loaded to R/Bioconductor software and normalized by GC-RMA with default settings.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Tse-Shun,,Huang
| | Sample_contact_laboratory | Informatics Biology Lab
| | Sample_contact_department | Institute of Microbiology and Immunology
| | Sample_contact_institute | National Yang-Ming University
| | Sample_contact_address | No.155, Sec.2, Linong Street
| | Sample_contact_city | Taipei City
| | Sample_contact_zip/postal_code | 112
| | Sample_contact_country | Taiwan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM978nnn/GSM978848/suppl/GSM978848_PB-EPC-2.CEL.gz
| | Sample_series_id | GSE39763
| | Sample_data_row_count | 54675
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