Search results for the GEO ID: GSE3997  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM91280 | GPL339 |
|
B10 TCR double positive rep 1
|
mouse thymocyte
|
B10, 6-8 week old female mouse, double positive thymocytes
|
B10 pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91280
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91280/suppl/GSM91280.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91280/suppl/GSM91280.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91281 | GPL339 |
|
B10 TCR double positive rep 2
|
mouse thymocyte
|
B10, 6-8 week old female mouse, double positive thymocytes
|
B10 pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91281
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91281/suppl/GSM91281.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91281/suppl/GSM91281.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91282 | GPL339 |
|
B10 TCR double positive rep 3
|
mouse thymocyte
|
B10, 6-8 week old female mouse, double positive thymocytes
|
B10 pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91282
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91282/suppl/GSM91282.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91282/suppl/GSM91282.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91283 | GPL339 |
|
NOD TCR double positive rep 1
|
mouse thymocyte
|
NOD diabetic, 6-8 week old female mouse, double positive thymocytes
|
NOD pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91283
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91283/suppl/GSM91283.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91283/suppl/GSM91283.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91284 | GPL339 |
|
NOD TCR double positive rep 2
|
mouse thymocyte
|
NOD diabetic, 6-8 week old female mouse, double positive thymocytes
|
NOD pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91284
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91284/suppl/GSM91284.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91284/suppl/GSM91284.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91285 | GPL339 |
|
NOD TCR double positive rep 3
|
mouse thymocyte
|
NOD diabetic, 6-8 week old female mouse, double positive thymocytes
|
NOD pre-selection transgenic TCR thymocytes
|
| Sample_geo_accession | GSM91285
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91285/suppl/GSM91285.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91285/suppl/GSM91285.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91286 | GPL339 |
|
B10 Dbl double positive rep 1
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
B10 pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91286
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91286/suppl/GSM91286.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91286/suppl/GSM91286.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91287 | GPL339 |
|
B10 Dbl double positive rep 2
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
B10 pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91287
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91287/suppl/GSM91287.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91287/suppl/GSM91287.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91288 | GPL339 |
|
B10 Dbl double positive rep 3
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
B10 pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91288
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91288/suppl/GSM91288.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91288/suppl/GSM91288.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91289 | GPL339 |
|
NOD Dbl double positive rep 1
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
NOD pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91289
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91289/suppl/GSM91289.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91289/suppl/GSM91289.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91290 | GPL339 |
|
NOD Dbl double positive rep 2
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
NOD pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91290
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91290/suppl/GSM91290.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91290/suppl/GSM91290.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91291 | GPL339 |
|
NOD Dbl double positive rep 3
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHELfemale mouse, double positive thymocytes
|
NOD pre-selection double transgenic TCR:insHEL thymocytes
|
| Sample_geo_accession | GSM91291
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91291/suppl/GSM91291.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91291/suppl/GSM91291.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91292 | GPL339 |
|
B10 TCR single positive rep 1
|
mouse thymocyte
|
B10, 6-8 week old, CD4+ thymocytes
|
B10 positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91292
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91292/suppl/GSM91292.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91292/suppl/GSM91292.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91293 | GPL339 |
|
B10 TCR single positive rep 2
|
mouse thymocyte
|
B10, 6-8 week old, CD4+ thymocytes
|
B10 positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91293
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91293/suppl/GSM91293.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91293/suppl/GSM91293.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91294 | GPL339 |
|
B10 TCR single positive rep 3
|
mouse thymocyte
|
B10, 6-8 week old, CD4+ thymocytes
|
B10 positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91294
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91294/suppl/GSM91294.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91294/suppl/GSM91294.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91295 | GPL339 |
|
NOD TCR single positive rep 1
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, CD4+ thymocytes
|
NOD positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91295
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91295/suppl/GSM91295.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91295/suppl/GSM91295.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91296 | GPL339 |
|
NOD TCR single positive rep 2
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, CD4+ thymocytes
|
NOD positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91296
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91296/suppl/GSM91296.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91296/suppl/GSM91296.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91297 | GPL339 |
|
NOD TCR single positive rep 3
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, CD4+ thymocytes
|
NOD positive selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91297
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91297/suppl/GSM91297.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91297/suppl/GSM91297.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91298 | GPL339 |
|
B10 Dbl single positive rep 1
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
B10 negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91298
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91298/suppl/GSM91298.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91298/suppl/GSM91298.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91299 | GPL339 |
|
B10 Dbl single positive rep 2
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
B10 negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91299
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91299/suppl/GSM91299.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91299/suppl/GSM91299.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91300 | GPL339 |
|
B10 Dbl single positive rep 3
|
mouse thymocyte
|
B10, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
B10 negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91300
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91300/suppl/GSM91300.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91300/suppl/GSM91300.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91301 | GPL339 |
|
NOD Dbl single positive rep 1
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
NOD negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91301
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91301/suppl/GSM91301.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91301/suppl/GSM91301.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91302 | GPL339 |
|
NOD Dbl single positive rep 2
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
NOD negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91302
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91302/suppl/GSM91302.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91302/suppl/GSM91302.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
GSM91303 | GPL339 |
|
NOD Dbl single positive rep 3
|
mouse thymocyte
|
NOD diabetic, 6-8 week old, double transgenic TCR:insHEL, CD4+ thymocytes
|
NOD negative selection CD4+ thymocytes
|
| Sample_geo_accession | GSM91303
| | Sample_status | Public on Dec 30 2006
| | Sample_submission_date | Jan 09 2006
| | Sample_last_update_date | Jul 21 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted from sorted thymus using trizol and further purified using RNeasy spin columns.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix GeneChip Eukaryotic Small Sample Target Labelling Assay Version II protocol was used on total RNA from 100000-1000000 cells
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kristine,,Hardy
| | Sample_contact_email | kristine.hardy@canberra.edu.au
| | Sample_contact_laboratory | Cytokine Gene Expression
| | Sample_contact_department |
| | Sample_contact_institute | University of Canberra
| | Sample_contact_address | University of Canberra
| | Sample_contact_city | Bruce
| | Sample_contact_state | ACT
| | Sample_contact_zip/postal_code | 0200
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91303/suppl/GSM91303.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM91nnn/GSM91303/suppl/GSM91303.EXP.gz
| | Sample_series_id | GSE3997
| | Sample_data_row_count | 22690
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
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