Search results for the GEO ID: GSE40281  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM990632 | GPL570 |
|
control HUVEC biological rep1
|
control HUVEC biological rep1
|
cell type: human umbilical vein endothelial cells
|
Gene expression data control HUVEC biological rep1
|
| Sample_geo_accession | GSM990632
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990632/suppl/GSM990632_MS517_I.1_101005.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990632/suppl/GSM990632_MS517_I.1_101005.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990633 | GPL570 |
|
control HUVEC biological rep2
|
control HUVEC biological rep2
|
cell type: human umbilical vein endothelial cells
|
Gene expression data control HUVEC biological rep2
|
| Sample_geo_accession | GSM990633
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990633/suppl/GSM990633_MS517_Probe_IV_1_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990633/suppl/GSM990633_MS517_Probe_IV_1_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990634 | GPL570 |
|
control HUVEC biological rep3
|
control HUVEC biological rep3
|
cell type: human umbilical vein endothelial cells
|
Gene expression data control HUVEC biological rep3
|
| Sample_geo_accession | GSM990634
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990634/suppl/GSM990634_MS517_Probe_V_1_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990634/suppl/GSM990634_MS517_Probe_V_1_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990635 | GPL570 |
|
FPV-infected HUVEC, biological rep1
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FPV-infected HUVEC, biological rep1
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cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC, biological rep1
|
| Sample_geo_accession | GSM990635
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990635/suppl/GSM990635_MS517_II.2_101005.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990635/suppl/GSM990635_MS517_II.2_101005.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990636 | GPL570 |
|
FPV-infected HUVEC, biological rep2
|
FPV-infected HUVEC, biological rep2
|
cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC, biological rep2
|
| Sample_geo_accession | GSM990636
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990636/suppl/GSM990636_MS517_Probe_IV_2_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990636/suppl/GSM990636_MS517_Probe_IV_2_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990637 | GPL570 |
|
FPV-infected HUVEC, biological rep3
|
FPV-infected HUVEC, biological rep3
|
cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC, biological rep3
|
| Sample_geo_accession | GSM990637
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990637/suppl/GSM990637_MS517_Probe_V_2_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990637/suppl/GSM990637_MS517_Probe_V_2_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990638 | GPL570 |
|
FPV-infected HUVEC in the presence of SB 202190, biological rep1
|
FPV-infected HUVEC in the presence of SB 202190, biological rep1
|
cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC in the presence of SB 202190, biological rep1
|
| Sample_geo_accession | GSM990638
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990638/suppl/GSM990638_MS517_II.4_101005.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990638/suppl/GSM990638_MS517_II.4_101005.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990639 | GPL570 |
|
FPV-infected HUVEC in the presence of SB 202190, biological rep2
|
FPV-infected HUVEC in the presence of SB 202190, biological rep2
|
cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC in the presence of SB 202190, biological rep2
|
| Sample_geo_accession | GSM990639
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990639/suppl/GSM990639_MS517_Probe_IV_4_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990639/suppl/GSM990639_MS517_Probe_IV_4_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
|
GSM990640 | GPL570 |
|
FPV-infected HUVEC in the presence of SB 202190, biological rep3
|
FPV-infected HUVEC in the presence of SB 202190, biological rep3
|
cell type: human umbilical vein endothelial cells
|
Gene expression data FPV-infected HUVEC in the presence of SB 202190, biological rep3
|
| Sample_geo_accession | GSM990640
| | Sample_status | Public on May 31 2013
| | Sample_submission_date | Aug 22 2012
| | Sample_last_update_date | May 31 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the RNeasy Kit (Qiagen) according to the manufacturer's instruction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cRNA were prepared and biotin-labeled according to the manufacturer’s instructions (Affymetrix, Santa Clara, CA, USA) from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Affymetrix U133 Plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner 3000.
| | Sample_data_processing | The data were analyzed with (GCOS) version 1.4 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Dorothee,,Viemann
| | Sample_contact_email | Viemann.Dorothee@mh-hannover.de
| | Sample_contact_phone | +49-511-532 - 7823
| | Sample_contact_department | Department of Pediatric Pulmonology, Allergy and Neonatology
| | Sample_contact_institute | Hannover Medical School
| | Sample_contact_address | Carl-Neuberg-Straße 1
| | Sample_contact_city | Hannover
| | Sample_contact_state | Deutschland
| | Sample_contact_zip/postal_code | 30625
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990640/suppl/GSM990640_MS517_Probe_V_4_270905.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM990nnn/GSM990640/suppl/GSM990640_MS517_Probe_V_4_270905.CHP.gz
| | Sample_series_id | GSE40281
| | Sample_data_row_count | 54675
| | |
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