Search results for the GEO ID: GSE40523  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM995543 | GPL1261 |
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PICs, biological replicate 1
|
PICs isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995543
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995543/suppl/GSM995543_30_01_pic.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
|
GSM995544 | GPL1261 |
|
PICs, biological replicate 2
|
PICs isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995544
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995544/suppl/GSM995544_14_02_pic.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
|
GSM995545 | GPL1261 |
|
PICs, biological replicate 3
|
PICs isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995545
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995545/suppl/GSM995545_28_02_pic.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
|
GSM995546 | GPL1261 |
|
SAT, biological replicate 1
|
satellite cells isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995546
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995546/suppl/GSM995546_30_01_sat.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
|
GSM995547 | GPL1261 |
|
SAT, biological replicate 2
|
satellite cells isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995547
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995547/suppl/GSM995547_14_02_sat.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
|
GSM995548 | GPL1261 |
|
SAT, biological replicate 3
|
satellite cells isolated from 1-week old muscle
|
tissue: hindlimbs skeletal muscle
strain: C57 black 6
age: 7 to 9 days old
|
Gene expression data from young postnatal skeletal muscle
|
| Sample_geo_accession | GSM995548
| | Sample_status | Public on Sep 01 2012
| | Sample_submission_date | Aug 31 2012
| | Sample_last_update_date | Sep 01 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Hindlimb skeletal muscles were minced and enzymatically digested. Single cell suspensions were stained, and PICs and satellite cells were purified using flow cytometry based upon CD34 and Sca1 expression.
| | Sample_growth_protocol_ch1 | Mice were bred in the laboratory animal facility
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using the Qiagen Rneasy Microkit, according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA.
| | Sample_hyb_protocol | Following fragmentation, 600 ng of cRNA were hybridized for 16 hours at 45C on the Affymetrix Mouse Genome 430 2.0 array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3 000 scanner.
| | Sample_data_processing | The data were analyzed with the BioConductor package of the R Software and normalization was performed using the GC-RMA algorithm.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Alice,,Pannérec
| | Sample_contact_email | alice.pannerec@gmail.com
| | Sample_contact_institute | INSERM 787
| | Sample_contact_address | 105 boulevard de l'hopital
| | Sample_contact_city | PARIS
| | Sample_contact_zip/postal_code | 75013
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM995nnn/GSM995548/suppl/GSM995548_28_02_sat.CEL.gz
| | Sample_series_id | GSE40523
| | Sample_data_row_count | 45037
| | |
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