Search results for the GEO ID: GSE40893  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1004268 | GPL570 |
|
Sorted Cell Population CD 14+ 1
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004268
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004268/suppl/GSM1004268_1.105+.rma.chp.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004268/suppl/GSM1004268_2.105+.CEL.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004269 | GPL570 |
|
Sorted Cell Population CD 105+ 1
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004269
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004269/suppl/GSM1004269_1.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004269/suppl/GSM1004269_1.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004270 | GPL570 |
|
Sorted Cell Population CD 105+ 10
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004270
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004270/suppl/GSM1004270_10.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004270/suppl/GSM1004270_10.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004271 | GPL570 |
|
Sorted Cell Population CD 14+ 11
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004271
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004271/suppl/GSM1004271_11.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004271/suppl/GSM1004271_11.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004272 | GPL570 |
|
Sorted Cell Population CD 14+ 12
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004272
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004272/suppl/GSM1004272_12.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004272/suppl/GSM1004272_12.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004273 | GPL570 |
|
Sorted Cell Population CD 14+ 13
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004273
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004273/suppl/GSM1004273_13.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004273/suppl/GSM1004273_13.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004274 | GPL570 |
|
Sorted Cell Population CD 105+ 14
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004274
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004274/suppl/GSM1004274_14.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004274/suppl/GSM1004274_14.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004275 | GPL570 |
|
Sorted Cell Population CD 105+ 15
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004275
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004275/suppl/GSM1004275_15.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004275/suppl/GSM1004275_15.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004276 | GPL570 |
|
Sorted Cell Population CD 105+ 16
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004276
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004276/suppl/GSM1004276_16.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004276/suppl/GSM1004276_16.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004277 | GPL570 |
|
Sorted Cell Population CD 14+ 17
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004277
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004277/suppl/GSM1004277_17.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004277/suppl/GSM1004277_17.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004278 | GPL570 |
|
Sorted Cell Population CD 34+ 18
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004278
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004278/suppl/GSM1004278_18.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004278/suppl/GSM1004278_18.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004279 | GPL570 |
|
Sorted Cell Population CD 34+ 19
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004279
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004279/suppl/GSM1004279_19.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004279/suppl/GSM1004279_19.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004280 | GPL570 |
|
Sorted Cell Population CD 105+ 20
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004280
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004280/suppl/GSM1004280_20.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004280/suppl/GSM1004280_20.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004281 | GPL570 |
|
Sorted Cell Population CD 34+ 21
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004281
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004281/suppl/GSM1004281_21.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004281/suppl/GSM1004281_21.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004282 | GPL570 |
|
Sorted Cell Population CD 105+ 22
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004282
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004282/suppl/GSM1004282_22.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004282/suppl/GSM1004282_22.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004283 | GPL570 |
|
Sorted Cell Population CD 14+ 23
|
Human Bone Marrow
|
cell type: CD14-positive cells
|
|
| Sample_geo_accession | GSM1004283
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004283/suppl/GSM1004283_23.34+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004283/suppl/GSM1004283_23.34+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004284 | GPL570 |
|
Sorted Cell Population CD 34+ 24
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004284
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004284/suppl/GSM1004284_24.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004284/suppl/GSM1004284_24.105+.ma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004285 | GPL570 |
|
Sorted Cell Population CD 105+ 3
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004285
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004285/suppl/GSM1004285_3.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004285/suppl/GSM1004285_3.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004286 | GPL570 |
|
Sorted Cell Population CD 34+ 4
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004286
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004286/suppl/GSM1004286_4.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004286/suppl/GSM1004286_4.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004287 | GPL570 |
|
Sorted Cell Population CD 105+ 5
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004287
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004287/suppl/GSM1004287_5.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004287/suppl/GSM1004287_5.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004288 | GPL570 |
|
Sorted Cell Population CD 34+ 6
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004288
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004288/suppl/GSM1004288_6.14+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004288/suppl/GSM1004288_6.14+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004289 | GPL570 |
|
Sorted Cell Population CD 105+ 7
|
Human Bone Marrow
|
cell type: CD105-positive erythroid cells
|
|
| Sample_geo_accession | GSM1004289
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004289/suppl/GSM1004289_7.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004289/suppl/GSM1004289_7.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
| | |
|
GSM1004290 | GPL570 |
|
Sorted Cell Population CD 34+ 8
|
Human Bone Marrow
|
cell type: CD34-positive common precursor cells
|
|
| Sample_geo_accession | GSM1004290
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004290/suppl/GSM1004290_8.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004290/suppl/GSM1004290_8.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
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GSM1004291 | GPL570 |
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Sorted Cell Population CD 105+ 9
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Human Bone Marrow
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cell type: CD105-positive erythroid cells
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| Sample_geo_accession | GSM1004291
| | Sample_status | Public on Feb 16 2013
| | Sample_submission_date | Sep 14 2012
| | Sample_last_update_date | Feb 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell sorting was performed using the Aria III sorter equipped with FACSDiva software Version 6.1.3 to obtain pure 95% subsets by sorting with specific marker combinations.
| | Sample_growth_protocol_ch1 | not applicable
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol was applied for total RNA extraction according to the manufacturer`s instructions, appending a phenolchlorophorm step.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Single-stranded cDNA was generated from the amplified cRNA with the WT cDNA Synthesis Kit (Affymetrix) and then fragmented and labeled with the WT Terminal Labeling Kit (Affymetrix).
| | Sample_hyb_protocol | Samples were hybridized with GeneChip HG-133 Arrays (Affymetrix) and scanned at site.
| | Sample_scan_protocol | Array scanning was performed according to the manufacturer's instruction (Affymetrix)
| | Sample_data_processing | We determined the Gene Cell intensity scaling using GeneChip Operating Software. Partek genomics suite was used to normalize and to apply RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Johannes,,Pröll
| | Sample_contact_email | johannes.proell@o.roteskreuz.at
| | Sample_contact_institute | Red Cross Transfusion Service for Upper Austria
| | Sample_contact_address | Krankenhausstrasse 7
| | Sample_contact_city | Linz
| | Sample_contact_zip/postal_code | 4020
| | Sample_contact_country | Austria
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004291/suppl/GSM1004291_9.105+.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1004nnn/GSM1004291/suppl/GSM1004291_9.105+.rma.chp.gz
| | Sample_series_id | GSE40893
| | Sample_data_row_count | 54675
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