Search results for the GEO ID: GSE41196 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1010314 | GPL8300 |
|
DCIS0011.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010314
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010314/suppl/GSM1010314_DCIS.02578.U95Av2.AB1.FROZ.LCM.EPI.103003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010315 | GPL8300 |
|
DCIS0062.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010315
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010315/suppl/GSM1010315_DCIS.02921.U95Av2.AB1.FROZ.LCM.EPI.052303.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010316 | GPL8300 |
|
DCIS0068.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010316
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010316/suppl/GSM1010316_DCIS.03102.U95Av2.AB1.FROZ.LCM.EPI.061903.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010317 | GPL8300 |
|
DCIS1528.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010317
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010317/suppl/GSM1010317_DCIS.04899.U95Av2.AB1.FROZ.LCM.EPI.052303.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010318 | GPL8300 |
|
DCIS2897.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010318
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010318/suppl/GSM1010318_DCIS.50020.U95Av2.AB1.FROZ.LCM.EPI.061903.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010319 | GPL8300 |
|
DCIS2921.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010319
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010319/suppl/GSM1010319_DCIS.50026.U95Av2.AB1.FROZ.LCM.EPI.093003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010320 | GPL8300 |
|
DCIS3102.2
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: ductal carcinoma in situ
|
Gene expression data from DCIS
|
Sample_geo_accession | GSM1010320
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010320/suppl/GSM1010320_DCIS.50029.U95Av2.AB1.FROZ.LCM.EPI.061903.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010321 | GPL8300 |
|
IBC.00700
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010321
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010321/suppl/GSM1010321_IBC.00700.U95Av2.AB1.FROZ.LCM.EPI.093003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010322 | GPL8300 |
|
IBC.01179
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010322
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010322/suppl/GSM1010322_IBC.01179.U95Av2.AB1.FROZ.LCM.EPI.093003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010323 | GPL8300 |
|
IBC.01286
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010323
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010323/suppl/GSM1010323_IBC.01286.U95Av2.AB1.FROZ.LCM.EPI.093003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010324 | GPL8300 |
|
IBC.01428
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010324
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010324/suppl/GSM1010324_IBC.01428.U95Av2.AB1.FROZ.LCM.EPI.060303.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010325 | GPL8300 |
|
IBC.02240
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010325
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010325/suppl/GSM1010325_IBC.02240.U95Av2.AB1.FROZ.LCM.EPI.100302.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010326 | GPL8300 |
|
IBC.02578
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
|
Sample_geo_accession | GSM1010326
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010326/suppl/GSM1010326_IBC.02578.U95Av2.AB1.FROZ.LCM.EPI.103003.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
| |
|
GSM1010327 | GPL8300 |
|
IBC.03528
|
Frozen Breast Biopsy
|
tissue: Breast
disease state: invasive breast cancer
|
Gene expression data from IBC
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Sample_geo_accession | GSM1010327
| Sample_status | Public on Sep 29 2012
| Sample_submission_date | Sep 27 2012
| Sample_last_update_date | Sep 29 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | laser capture microdissection of target cells to estimated >95% total cells using Ambion RNA extraction kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| Sample_hyb_protocol | standard Affymetrix protocol using Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Affymetrix Scanner
| Sample_data_processing | The data were analyzed with dChip software
| Sample_platform_id | GPL8300
| Sample_contact_name | Sangjun,,Lee
| Sample_contact_email | sangjun_lee@yahoo.com
| Sample_contact_phone | 314-454-5119
| Sample_contact_fax | 314-454-5505
| Sample_contact_laboratory | Dr. Allred
| Sample_contact_department | Pathology
| Sample_contact_institute | Washington University at St. Louis
| Sample_contact_address | 4940 Parkview Place
| Sample_contact_city | St Louis
| Sample_contact_state | MO
| Sample_contact_zip/postal_code | 63110
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1010nnn/GSM1010327/suppl/GSM1010327_IBC.03528.U95Av2.AB1.FROZ.LCM.EPI.060303.CEL.gz
| Sample_series_id | GSE41196
| Sample_series_id | GSE41228
| Sample_data_row_count | 12558
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