Search results for the GEO ID: GSE41328  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1014798 | GPL570 |
|
AFX platform, lab 1, matched normal colon tissue, biological rep 1
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006 [PMID: 17160039]
AFX_1_N1
|
| Sample_geo_accession | GSM1014798
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014798/suppl/GSM1014798_AFX_1_N1.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014799 | GPL570 |
|
AFX platform, lab 1, matched normal colon tissue, biological rep 2
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_N2
|
| Sample_geo_accession | GSM1014799
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014799/suppl/GSM1014799_AFX_1_N2.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014800 | GPL570 |
|
AFX platform, lab 1, matched normal colon tissue, biological rep 3
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_N3
|
| Sample_geo_accession | GSM1014800
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014800/suppl/GSM1014800_AFX_1_N3.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014801 | GPL570 |
|
AFX platform, lab 1, matched normal colon tissue, biological rep 4
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_N4
|
| Sample_geo_accession | GSM1014801
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014801/suppl/GSM1014801_AFX_1_N4.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014802 | GPL570 |
|
AFX platform, lab 1, matched normal colon tissue, biological rep 5
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_N5
|
| Sample_geo_accession | GSM1014802
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014802/suppl/GSM1014802_AFX_1_N5.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014803 | GPL570 |
|
AFX platform, lab 1, tumor, colon adenocarcinoma, biological rep 1
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_T1
|
| Sample_geo_accession | GSM1014803
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014803/suppl/GSM1014803_AFX_1_T1.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014804 | GPL570 |
|
AFX platform, lab 1, tumor, colon adenocarcinoma, biological rep 2
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_T2
|
| Sample_geo_accession | GSM1014804
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014804/suppl/GSM1014804_AFX_1_T2.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014805 | GPL570 |
|
AFX platform, lab 1, tumor, colon adenocarcinoma, biological rep 3
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_T3
|
| Sample_geo_accession | GSM1014805
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014805/suppl/GSM1014805_AFX_1_T3.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014806 | GPL570 |
|
AFX platform, lab 1, tumor, colon adenocarcinoma, biological rep 4
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_T4
|
| Sample_geo_accession | GSM1014806
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014806/suppl/GSM1014806_AFX_1_T4.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014807 | GPL570 |
|
AFX platform, lab 1, tumor, colon adenocarcinoma, biological rep 5
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 1
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_1_T5
|
| Sample_geo_accession | GSM1014807
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014807/suppl/GSM1014807_AFX_1_T5.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014808 | GPL570 |
|
AFX platform, lab 2, matched normal colon tissue, biological rep 1
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_N1
|
| Sample_geo_accession | GSM1014808
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014808/suppl/GSM1014808_AFX_2_N1.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014809 | GPL570 |
|
AFX platform, lab 2, matched normal colon tissue, biological rep 2
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_N2
|
| Sample_geo_accession | GSM1014809
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014809/suppl/GSM1014809_AFX_2_N2.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014810 | GPL570 |
|
AFX platform, lab 2, matched normal colon tissue, biological rep 3
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_N3
|
| Sample_geo_accession | GSM1014810
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014810/suppl/GSM1014810_AFX_2_N3.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014811 | GPL570 |
|
AFX platform, lab 2, matched normal colon tissue, biological rep 4
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_N4
|
| Sample_geo_accession | GSM1014811
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014811/suppl/GSM1014811_AFX_2_N4.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014812 | GPL570 |
|
AFX platform, lab 2, matched normal colon tissue, biological rep 5
|
Sample type N (Normal, matched normal colon tissue)
|
tissue: Normal, matched normal colon tissue
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_N5
|
| Sample_geo_accession | GSM1014812
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014812/suppl/GSM1014812_AFX_2_N5.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014813 | GPL570 |
|
AFX platform, lab 2, tumor, colon adenocarcinoma, biological rep 1
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_T1
|
| Sample_geo_accession | GSM1014813
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014813/suppl/GSM1014813_AFX_2_T1.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014814 | GPL570 |
|
AFX platform, lab 2, tumor, colon adenocarcinoma, biological rep 2
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_T2
|
| Sample_geo_accession | GSM1014814
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014814/suppl/GSM1014814_AFX_2_T2.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014815 | GPL570 |
|
AFX platform, lab 2, tumor, colon adenocarcinoma, biological rep 3
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_T3
|
| Sample_geo_accession | GSM1014815
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014815/suppl/GSM1014815_AFX_2_T3.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014816 | GPL570 |
|
AFX platform, lab 2, tumor, colon adenocarcinoma, biological rep 4
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_T4
|
| Sample_geo_accession | GSM1014816
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014816/suppl/GSM1014816_AFX_2_T4.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
GSM1014817 | GPL570 |
|
AFX platform, lab 2, tumor, colon adenocarcinoma, biological rep 5
|
Sample type T (Tumor, colon adenocarcinoma)
|
tissue: Tumor, colon adenocarcinoma
lab: 2
|
MAQC colon tumor samples used in Lin G, He X, Ji H, Shi L, Davis R and Zhong S, Nature Biotechnology, October, 2006.
AFX_2_T5
|
| Sample_geo_accession | GSM1014817
| | Sample_status | Public on Oct 03 2012
| | Sample_submission_date | Oct 03 2012
| | Sample_last_update_date | Oct 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Colorectal adenocarcinomas and matched normal colonic RNA sample were purchased from Oncomatrix, Inc., San Diego, CA.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | 5 µg of total RNA was used to synthesize cRNA for each sample.
| | Sample_hyb_protocol | 20 µg of cRNA was hybridized to each individual microarray (HG-U133-Plus-2.0). The microarrays were hybridized for 16 hours at 45°C, stained, and washed according to an Affymetrix protocol (EukGE-WS2v4) using an Affymetrix fluidics station.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix scanner.
| | Sample_data_processing | The CEL file data were analyzed with BioConductor to generate probeset level data using the justPlier() function. Probe-level data were quantile normalized before PLIER summarization per test site (10 arrays). An offset value of 16 was then added to each probeset-level data point.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chieh-Chun,,Chen
| | Sample_contact_email | cchen63@illinois.edu
| | Sample_contact_department | Bioengineering
| | Sample_contact_institute | University of illinois
| | Sample_contact_address | 1206 West Gregory Drive
| | Sample_contact_city | Urbana
| | Sample_contact_state | Illinois
| | Sample_contact_zip/postal_code | 61801
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1014nnn/GSM1014817/suppl/GSM1014817_AFX_2_T5.CEL.gz
| | Sample_series_id | GSE41328
| | Sample_data_row_count | 54675
| | |
|
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