Search results for the GEO ID: GSE41498 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1018298 | GPL570 |
|
serous_EOC
|
serous epithelial ovarian carcinoma
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primary tissue: ovary
malignancy: malignant
histological subtype: serous carcinoma
tumor grade: 2 to 3
tumor stage: IIc
age: 74.99
clinical data: Pltx;Y, Tax;N, Neo;N, Response;complete
time_to_death (yr): 11.2
event (1=death): 1
time_to_relapse (yr): 11.2
event (1=relapse): 0
residual disease: none
debulking: total macroscopic
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tumour
|
Sample_geo_accession | GSM1018298
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018298/suppl/GSM1018298_tumour.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018299 | GPL570 |
|
benign_serous_cyst
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cyst
|
benign_SC
|
Sample_geo_accession | GSM1018299
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018299/suppl/GSM1018299_benign_SC.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018300 | GPL570 |
|
benign_serous_cystadenoma_1
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenoma
|
benign_SCA1
|
Sample_geo_accession | GSM1018300
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018300/suppl/GSM1018300_benign_SCA_1.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018301 | GPL570 |
|
benign_serous_cystadenoma_2
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenoma
|
benign_SCA2
|
Sample_geo_accession | GSM1018301
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018301/suppl/GSM1018301_benign_SCA_2.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018302 | GPL570 |
|
benign_serous_cystadenoma_3
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenoma
|
benign_SCA3
|
Sample_geo_accession | GSM1018302
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018302/suppl/GSM1018302_benign_SCA_3.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018303 | GPL570 |
|
benign_serous_cystadenofibroma_1
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenofibroma
|
benign_SCAF1
|
Sample_geo_accession | GSM1018303
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018303/suppl/GSM1018303_benign_SCAF_1.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018304 | GPL570 |
|
benign_serous_cystadenofibroma_2
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenofibroma
|
benign_SCAF2
|
Sample_geo_accession | GSM1018304
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018304/suppl/GSM1018304_benign_SCAF_2.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018305 | GPL570 |
|
benign_serous_cystadenofibroma_3
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenofibroma
|
benign_SCAF3
|
Sample_geo_accession | GSM1018305
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018305/suppl/GSM1018305_benign_SCAF_3.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
|
GSM1018306 | GPL570 |
|
benign_serous_cystadenofibroma_4
|
benign serous ovarian lesion
|
primary tissue: ovary
malignancy: benign
histological subtype: serous cystadenofibroma
|
benign_SCAF4
|
Sample_geo_accession | GSM1018306
| Sample_status | Public on Oct 12 2012
| Sample_submission_date | Oct 11 2012
| Sample_last_update_date | Oct 12 2012
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Genome Institute of Singapore
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Genome Institute of Singapore
| Sample_hyb_protocol | Genome Institute of Singapore
| Sample_scan_protocol | Genome Institute of Singapore
| Sample_data_processing | RMA implementation provided in the Affy package (v1.28.0) of Bioconductor was used to obtain normalised (log2) intensity values for the set of arrays.
| Sample_platform_id | GPL570
| Sample_contact_name | Ed,,Curry
| Sample_contact_email | e.curry@imperial.ac.uk
| Sample_contact_institute | Imperial College London
| Sample_contact_address | Hammersmith Hospital, Du Cane Road
| Sample_contact_city | London
| Sample_contact_zip/postal_code | W12 0NN
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1018nnn/GSM1018306/suppl/GSM1018306_benign_SCAF_4.CEL.gz
| Sample_series_id | GSE41498
| Sample_series_id | GSE41500
| Sample_data_row_count | 54675
| |
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