Search results for the GEO ID: GSE41851  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1026370 | GPL570 |
|
MALC, sample 1
|
Human B lymphoid RL cell line (ATCC: CRL-2261), MALC, 10 days
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026370
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026370/suppl/GSM1026370_MALC_1.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
|
GSM1026371 | GPL570 |
|
MALC, sample 2
|
Human B lymphoid RL cell line (ATCC: CRL-2261), MALC, 10 days
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026371
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026371/suppl/GSM1026371_MALC_2.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
|
GSM1026372 | GPL570 |
|
MALC, sample 3
|
Human B lymphoid RL cell line (ATCC: CRL-2261), MALC, 10 days
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026372
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026372/suppl/GSM1026372_MALC_3.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
|
GSM1026373 | GPL570 |
|
Suspension cells, sample 1
|
Human B lymphoid RL cell line (ATCC: CRL-2261), exponential
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026373
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026373/suppl/GSM1026373_2D_1.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
|
GSM1026374 | GPL570 |
|
Suspension cells, sample 2
|
Human B lymphoid RL cell line (ATCC: CRL-2261), exponential
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026374
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026374/suppl/GSM1026374_2D_2.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
|
GSM1026375 | GPL570 |
|
Suspension cells, sample 3
|
Human B lymphoid RL cell line (ATCC: CRL-2261), exponential
|
genotype: t(14,18)+
|
|
| Sample_geo_accession | GSM1026375
| | Sample_status | Public on Oct 27 2012
| | Sample_submission_date | Oct 26 2012
| | Sample_last_update_date | Oct 27 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No treatment
| | Sample_growth_protocol_ch1 | Suspension cells were collected in exponential growth phase ; MALC were collected after 10 days culture,
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA , amplified and labeled following the one-cycle target labelling protocol (Affymetrix, Santa Clara, CA, USA).
| | Sample_hyb_protocol | Labaled complementary RNA (cRNA) from these samples was then fragmented and hybridized to Affymetrix GeneChip arrays HG-U133 plus 2,0
| | Sample_scan_protocol | the chips were then washed, scanned on the Affymetrix Fluidics Station 400 and analyzed with Genechip Operating Software
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5,0 (MAS 5,0) using Affymetrix default analysis settings and global scaling as normalization method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Pauline,,GRAVELLE
| | Sample_contact_email | pauline.gravelle@inserm.fr
| | Sample_contact_institute | INSERM UMR1037
| | Sample_contact_address | CHU Purpan, Pavillon Lefebvre
| | Sample_contact_city | TOULOUSE
| | Sample_contact_zip/postal_code | 31024
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1026nnn/GSM1026375/suppl/GSM1026375_2D_3.CEL.gz
| | Sample_series_id | GSE41851
| | Sample_series_id | GSE41856
| | Sample_data_row_count | 54675
| | |
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