Search results for the GEO ID: GSE41972  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1029375 | GPL570 |
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as1411 MCF7-72h-2
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MCF7 cells treated with AS1411 aptamer
|
cell line: MCF7
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Gene expression data from MCF7 cells treated with AS1411 aptamer
|
| Sample_geo_accession | GSM1029375
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029375/suppl/GSM1029375_FP-2.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
| | |
|
GSM1029376 | GPL570 |
|
as1411 MCF7-72h-3
|
MCF7 cells treated with AS1411 aptamer
|
cell line: MCF7
|
Gene expression data from MCF7 cells treated with AS1411 aptamer
|
| Sample_geo_accession | GSM1029376
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029376/suppl/GSM1029376_FP-3.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
| | |
|
GSM1029377 | GPL570 |
|
as1411 MCF7-72h-4
|
MCF7 cells treated with AS1411 aptamer
|
cell line: MCF7
|
Gene expression data from MCF7 cells treated with AS1411 aptamer
|
| Sample_geo_accession | GSM1029377
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029377/suppl/GSM1029377_FP-4.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
| | |
|
GSM1029378 | GPL570 |
|
dctp-1 MCF7-72h
|
MCF7 cells treated with control drug
|
cell line: MCF7
|
Gene expression data from MCF7 cells treated with control drug
|
| Sample_geo_accession | GSM1029378
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029378/suppl/GSM1029378_FP-5.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
| | |
|
GSM1029379 | GPL570 |
|
dctp-2 MCF7-72h
|
MCF7 cells treated with control drug
|
cell line: MCF7
|
Gene expression data from MCF7 cells treated with control drug
|
| Sample_geo_accession | GSM1029379
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029379/suppl/GSM1029379_FP-6.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
| | |
|
GSM1029380 | GPL570 |
|
dctp-3 MCF7-72h
|
MCF7 cells treated with control drug
|
cell line: MCF7
|
Gene expression data from MCF7 cells treated with control drug
|
| Sample_geo_accession | GSM1029380
| | Sample_status | Public on Nov 02 2012
| | Sample_submission_date | Nov 01 2012
| | Sample_last_update_date | Nov 02 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | MCF7 cells were treated with the control drug or AS1411 aptamer. After 72hours total RNA was collected and analyzed by Affymetrix U133 plus.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | See Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Luciano,,Cascione
| | Sample_contact_email | luciano.cascione@osumc.edu
| | Sample_contact_phone | 6142927278
| | Sample_contact_department | Molecular Virology, Immunology and Medical Genetics
| | Sample_contact_institute | The Ohio State University
| | Sample_contact_address | 460 W 12th Ave.
| | Sample_contact_city | Columbus
| | Sample_contact_state | OHIO
| | Sample_contact_zip/postal_code | 43215
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1029nnn/GSM1029380/suppl/GSM1029380_FP-7.CEL.gz
| | Sample_series_id | GSE41972
| | Sample_series_id | GSE41973
| | Sample_data_row_count | 54675
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