Search results for the GEO ID: GSE42672  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1047770 | GPL570 |
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Induced endothelial cells from CRL-2097
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Purified cells
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cell type: Induced endothelial cells
cell line: CRL-2097
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Gene expression data from cells
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| Sample_geo_accession | GSM1047770
| | Sample_status | Public on Dec 03 2012
| | Sample_submission_date | Dec 02 2012
| | Sample_last_update_date | Dec 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No special treatment
| | Sample_growth_protocol_ch1 | Cells were cultured at 37℃, 5%CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | jun,,li
| | Sample_contact_email | jun-li04@mails.tsinghua.edu.cn
| | Sample_contact_institute | tsinghua university
| | Sample_contact_address | heqinglu haidianqu
| | Sample_contact_city | beijing
| | Sample_contact_zip/postal_code | 100084
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1047nnn/GSM1047770/suppl/GSM1047770_iEND-1.CEL.gz
| | Sample_series_id | GSE42672
| | Sample_data_row_count | 54613
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GSM1047771 | GPL570 |
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Induced endothelial cells from BJ
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Purified cells
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cell type: Induced endothelial cells
cell line: BJ
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Gene expression data from cells
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| Sample_geo_accession | GSM1047771
| | Sample_status | Public on Dec 03 2012
| | Sample_submission_date | Dec 02 2012
| | Sample_last_update_date | Dec 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No special treatment
| | Sample_growth_protocol_ch1 | Cells were cultured at 37℃, 5%CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | jun,,li
| | Sample_contact_email | jun-li04@mails.tsinghua.edu.cn
| | Sample_contact_institute | tsinghua university
| | Sample_contact_address | heqinglu haidianqu
| | Sample_contact_city | beijing
| | Sample_contact_zip/postal_code | 100084
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1047nnn/GSM1047771/suppl/GSM1047771_iEND-2.CEL.gz
| | Sample_series_id | GSE42672
| | Sample_data_row_count | 54613
| | |
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GSM1047772 | GPL570 |
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Human Umbilical Vein Endothelial Cells
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Primary cells
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cell type: Human Umbilical Vein Endothelial Cells
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Gene expression data from cells
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| Sample_geo_accession | GSM1047772
| | Sample_status | Public on Dec 03 2012
| | Sample_submission_date | Dec 02 2012
| | Sample_last_update_date | Dec 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No special treatment
| | Sample_growth_protocol_ch1 | Cells were cultured at 37℃, 5%CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | jun,,li
| | Sample_contact_email | jun-li04@mails.tsinghua.edu.cn
| | Sample_contact_institute | tsinghua university
| | Sample_contact_address | heqinglu haidianqu
| | Sample_contact_city | beijing
| | Sample_contact_zip/postal_code | 100084
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1047nnn/GSM1047772/suppl/GSM1047772_HUVEC.CEL.gz
| | Sample_series_id | GSE42672
| | Sample_data_row_count | 54613
| | |
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GSM1047773 | GPL570 |
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Fibroblast
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Primary cells
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cell type: Fibroblast
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Gene expression data from cells
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| Sample_geo_accession | GSM1047773
| | Sample_status | Public on Dec 03 2012
| | Sample_submission_date | Dec 02 2012
| | Sample_last_update_date | Dec 03 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | No special treatment
| | Sample_growth_protocol_ch1 | Cells were cultured at 37℃, 5%CO2
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip mouse 430 2.0 Genome Array in the Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the affymetrix scanner 3000 7G.The scanned images were first assessed by visual inspection then analyzed to generate raw data files saved as CEL files using the default setting of AGCC.
| | Sample_data_processing | The data were analyzed with Expression Console Software using RMA algorithm.
| | Sample_platform_id | GPL570
| | Sample_contact_name | jun,,li
| | Sample_contact_email | jun-li04@mails.tsinghua.edu.cn
| | Sample_contact_institute | tsinghua university
| | Sample_contact_address | heqinglu haidianqu
| | Sample_contact_city | beijing
| | Sample_contact_zip/postal_code | 100084
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1047nnn/GSM1047773/suppl/GSM1047773_Fib.CEL.gz
| | Sample_series_id | GSE42672
| | Sample_data_row_count | 54613
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