Search results for the GEO ID: GSE43729  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1069749 | GPL1261 |
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Fetal Liver HSC Rep1
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Fetal Liver HSC
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strain: C57BL/6
age: e14.5
gender: --
tissue: fetal liver
cell type: hematopoietic stem cells
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|
| Sample_geo_accession | GSM1069749
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069749/suppl/GSM1069749_FL_HSC.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
| | |
|
GSM1069750 | GPL1261 |
|
Fetal Liver HSC Rep2
|
Fetal Liver HSC
|
strain: C57BL/6
age: e14.5
gender: --
tissue: fetal liver
cell type: hematopoietic stem cells
|
|
| Sample_geo_accession | GSM1069750
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069750/suppl/GSM1069750_FL_HSC_r2.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
| | |
|
GSM1069751 | GPL1261 |
|
Fetal Liver HSC Rep3
|
Fetal Liver HSC
|
strain: C57BL/6
age: e14.5
gender: --
tissue: fetal liver
cell type: hematopoietic stem cells
|
|
| Sample_geo_accession | GSM1069751
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069751/suppl/GSM1069751_FL_HSC_r3.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
| | |
|
GSM1069756 | GPL1261 |
|
Old HSC Rep1
|
Old HSC
|
strain: C57BL/6
age: 25 months
gender: male
tissue: bone marrow
cell type: hematopoietic stem cells
|
|
| Sample_geo_accession | GSM1069756
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069756/suppl/GSM1069756_o_HSC_1.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
| | |
|
GSM1069757 | GPL1261 |
|
Old HSC Rep2
|
Old HSC
|
strain: C57BL/6
age: 25 months
gender: male
tissue: bone marrow
cell type: hematopoietic stem cells
|
|
| Sample_geo_accession | GSM1069757
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069757/suppl/GSM1069757_o_HSC_2.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
| | |
|
GSM1069758 | GPL1261 |
|
Old HSC Rep3
|
Old HSC
|
strain: C57BL/6
age: 25 months
gender: male
tissue: bone marrow
cell type: hematopoietic stem cells
|
|
| Sample_geo_accession | GSM1069758
| | Sample_status | Public on Feb 14 2013
| | Sample_submission_date | Jan 24 2013
| | Sample_last_update_date | Feb 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA extraction using standard methods.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized for 16 hr at 45C on GeneChip Mouse 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip 3000 7G with GCOS version 1.4.0.036
| | Sample_data_processing | The data were normalized using GC-RMA in R using the the gcrma package from Bioconductor.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Isabel,,Beerman
| | Sample_contact_institute | Boston Childrens Hospital
| | Sample_contact_address | 200 Longwood Ave, WAB 156
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1069nnn/GSM1069758/suppl/GSM1069758_o_HSC_3.CEL.gz
| | Sample_series_id | GSE43729
| | Sample_data_row_count | 45101
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