Search results for the GEO ID: GSE44541  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1086209 | GPL570 |
|
DMSO treated -1
|
BE(2)-C_DMSO
|
cell type: BE(2)-C neuronal cells
treated with: DMSO for 24h
|
1597 BE2C A1
|
| Sample_geo_accession | GSM1086209
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086209/suppl/GSM1086209_1597_BE2C_DMSO-1.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086209/suppl/GSM1086209_1597_BE2C_DMSO-1.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086210 | GPL570 |
|
DMSO treated -2
|
BE(2)-C_DMSO
|
cell type: BE(2)-C neuronal cells
treated with: DMSO for 24h
|
1597 BE2C A2
|
| Sample_geo_accession | GSM1086210
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086210/suppl/GSM1086210_1597_BE2C_DMSO-2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086210/suppl/GSM1086210_1597_BE2C_DMSO-2.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086211 | GPL570 |
|
DMSO treated -3
|
BE(2)-C_DMSO
|
cell type: BE(2)-C neuronal cells
treated with: DMSO for 24h
|
1597 BE2C A3
|
| Sample_geo_accession | GSM1086211
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086211/suppl/GSM1086211_1597_BE2C_DMSO-3.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086211/suppl/GSM1086211_1597_BE2C_DMSO-3.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086212 | GPL570 |
|
Antimycin A1a treated -1
|
BE(2)-C_purified antimycin A1a
|
cell type: BE(2)-C neuronal cells
treated with: 200 nM purified antimycin A1a for 24h
|
1597 BE2C B1
|
| Sample_geo_accession | GSM1086212
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086212/suppl/GSM1086212_1597_BE2C_AR212-5-1.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086212/suppl/GSM1086212_1597_BE2C_AR212-5-1.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086213 | GPL570 |
|
Antimycin A1a treated -2
|
BE(2)-C_purified antimycin A1a
|
cell type: BE(2)-C neuronal cells
treated with: 200 nM purified antimycin A1a for 24h
|
1597 BE2C B2
|
| Sample_geo_accession | GSM1086213
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086213/suppl/GSM1086213_1597_BE2C_AR212-5-2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086213/suppl/GSM1086213_1597_BE2C_AR212-5-2.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086214 | GPL570 |
|
Antimycin A1a treated -3
|
BE(2)-C_purified antimycin A1a
|
cell type: BE(2)-C neuronal cells
treated with: 200 nM purified antimycin A1a for 24h
|
1597 BE2C B3
|
| Sample_geo_accession | GSM1086214
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086214/suppl/GSM1086214_1597_BE2C_AR212-5-3.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086214/suppl/GSM1086214_1597_BE2C_AR212-5-3.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086215 | GPL570 |
|
Unfractionated antimycin A treated -1
|
BE(2)-C_unfractionated antimycin A
|
cell type: BE(2)-C neuronal cells
treated with: unfractionated antimycin A for 24 h
|
1597 BE2C C1
|
| Sample_geo_accession | GSM1086215
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086215/suppl/GSM1086215_1597_BE2C_Antimycin_A-1.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086215/suppl/GSM1086215_1597_BE2C_Antimycin_A-1.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086216 | GPL570 |
|
Unfractionated antimycin A treated -2
|
BE(2)-C_unfractionated antimycin A
|
cell type: BE(2)-C neuronal cells
treated with: unfractionated antimycin A for 24 h
|
1597 BE2C C2
|
| Sample_geo_accession | GSM1086216
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086216/suppl/GSM1086216_1597_BE2C_Antimycin_A-2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086216/suppl/GSM1086216_1597_BE2C_Antimycin_A-2.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
|
GSM1086217 | GPL570 |
|
Unfractionated antimycin A treated -3
|
BE(2)-C_unfractionated antimycin A
|
cell type: BE(2)-C neuronal cells
treated with: unfractionated antimycin A for 24 h
|
1597 BE2C C3
|
| Sample_geo_accession | GSM1086217
| | Sample_status | Public on Feb 22 2013
| | Sample_submission_date | Feb 21 2013
| | Sample_last_update_date | Feb 22 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cells incubated with either DMSO or 200 nM purified antimycin A1a or unfractionated antimycin A for 24 h.
| | Sample_growth_protocol_ch1 | BE(2)-C neuronal cells grown in DMEM (high glucose formulation) with 0.1 mM non-essential amino acids, 10 U/ml penicillin, 10 ug/ml streptomycin, and 5% bovine growth serum at 37C in 5% CO2.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA harvested using Trizol with subsequent purification using RNAsy (both according to the manufacturer's instructions). Quantity/purity examined by A260/280 and non-denaturing gel electrophorises with EtBr staining.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA labelled by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_hyb_protocol | Hybridization with Affymetrix Human Genome U133 Plus 2.0 Genechips conducted by commecial vendor (SeqWright DNA Technology Services, Houston TX).
| | Sample_scan_protocol | Image capture done by commecial vendor with Affymetrix 7G scanner (SeqWright DNA Technology Services, Houston TX).
| | Sample_data_processing | Primary data analysis done by commecial vendor using Mas5.0 algorithm (SeqWright DNA Technology Services, Houston TX).
| | Sample_platform_id | GPL570
| | Sample_contact_name | David,,Miller
| | Sample_contact_email | milldavi@umich.edu
| | Sample_contact_phone | 734-763-0565
| | Sample_contact_department | Internal Medicine
| | Sample_contact_institute | University of Michigan
| | Sample_contact_address | 3560B MSRB II, 1150 W. Medical Center Dr.
| | Sample_contact_city | Ann Arbor
| | Sample_contact_state | MI
| | Sample_contact_zip/postal_code | 48109-5688
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086217/suppl/GSM1086217_1597_BE2C_Antimycin_A-3.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1086nnn/GSM1086217/suppl/GSM1086217_1597_BE2C_Antimycin_A-3.mas5.CHP.gz
| | Sample_series_id | GSE44541
| | Sample_data_row_count | 54675
| | |
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